DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq6 and kmo-1

DIOPT Version :9

Sequence 1:NP_608934.1 Gene:Coq6 / 33777 FlyBaseID:FBgn0031713 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_506025.1 Gene:kmo-1 / 179657 WormBaseID:WBGene00011089 Length:461 Species:Caenorhabditis elegans


Alignment Length:295 Identity:70/295 - (23%)
Similarity:110/295 - (37%) Gaps:98/295 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 AKESPNVEIL--NKAR----------IQCV----RLPRDSNSN----HSELQLEDGRNFSCDLLI 214
            |::||||:..  :|.:          :||.    ::|...|.:    |:|..:|      .||::
 Worm   116 AEKSPNVKFFFEHKVKNVDYDKKQLVVQCTSQPSKIPTFGNKSPPQEHAEFHVE------ADLIL 174

  Fly   215 GADGANSVVRKEM----NVDVFSLNYDRMGLVATLELGEDACDNSVAWQ----RFLPNGPVALLP 271
            ..|||.|.||:.:    ..| ||..|...|.|   ||...|.:|..|::    ...|.|...|:.
 Worm   175 ACDGAYSAVRRSLMTIPRFD-FSQEYIEHGYV---ELNIMANNNEFAFEENVFHLWPRGHFTLIA 235

  Fly   272 LTDRLSSLVWSTTNEQAKMLQALPPTEFVDALNEAFCRQYPRVELADKAVQALNSLFGHN----- 331
            |.:|         ::...:....|.:||...::.:               :.:.|.|..|     
 Worm   236 LANR---------DKTFTVTIFAPFSEFEKHMSTS---------------EDVLSFFEENFPDAF 276

  Fly   332 ---GSQH------QVQYPPRVCGVLDKSRATFPLGFLHASSYVCNGAALVGDAAHRVHPLAGQGV 387
               |.:|      :|:..|.|      |....|..|.       :...|:|||||.:.|..|||:
 Worm   277 LLLGKEHIADTFNRVKPQPLV------SIKCSPHSFF-------DNLVLMGDAAHAMVPFYGQGM 328

  Fly   388 NLGFSDVRYLVESL---------AAGAYAGFKLGD 413
            |.||.|.....|:|         |...|:..::.|
 Worm   329 NCGFEDCLVFSETLEEYGNDIAKAVKVYSDGRVND 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq6NP_608934.1 Ubi-OHases 58..476 CDD:273913 70/295 (24%)
COQ6 58..471 CDD:273914 70/295 (24%)
kmo-1NP_506025.1 FixC 4..436 CDD:223717 70/295 (24%)
NADB_Rossmann 4..363 CDD:304358 69/293 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0654
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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