DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cox11 and cox-11

DIOPT Version :10

Sequence 1:NP_723086.1 Gene:Cox11 / 33776 FlyBaseID:FBgn0051648 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_502547.2 Gene:cox-11 / 186814 WormBaseID:WBGene00010437 Length:260 Species:Caenorhabditis elegans


Alignment Length:206 Identity:119/206 - (57%)
Similarity:151/206 - (73%) Gaps:17/206 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KSTDSPEDAARKLRAKSTLYYITAGGVLIVGLSYAAVPLYSIFCQAYSYGGTTTQGHDAEKVEHM 100
            ||.|:          ::..||:.:..::.:|.::||:|.|.|||:..|:||.|....|.:|:.:|
 Worm    54 KSADT----------RNYTYYVMSLVIVAIGCTFAAIPAYRIFCEQTSFGGLTQVAKDFDKIANM 108

  Fly   101 KKIEDRVLKIRFNADIGSSMRWNFKPQQYEIKVAPGETALAFYTARNPTDKPVIGISTYNVIPFE 165
            ||.|||:::::||:|:.|||||.|||||:||.|.||||||||||||||||||:||||:||:.||:
 Worm   109 KKCEDRLIRVQFNSDVPSSMRWEFKPQQHEIYVHPGETALAFYTARNPTDKPIIGISSYNLTPFQ 173

  Fly   166 AGAYFNKIQCFCFEEQQLNPHEEVDMPVFFYIDPEITADPALETCDTITLSYTFFEAKEGLKL-- 228
            |..|||||||||||||.|||.|:||:||||||||:...|||||..|:|.|||||||||.||||  
 Worm   174 AAYYFNKIQCFCFEEQILNPGEQVDLPVFFYIDPDYVNDPALEYLDSILLSYTFFEAKSGLKLPD 238

  Fly   229 -----NFPSYA 234
                 |.||.|
 Worm   239 PFDPKNRPSIA 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cox11NP_723086.1 CtaG_Cox11 71..221 CDD:461313 100/149 (67%)
cox-11NP_502547.2 CtaG_Cox11 79..229 CDD:461313 100/149 (67%)

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