DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6907 and elp4

DIOPT Version :9

Sequence 1:NP_001285628.1 Gene:CG6907 / 33775 FlyBaseID:FBgn0031711 Length:437 Species:Drosophila melanogaster
Sequence 2:XP_009301242.1 Gene:elp4 / 550331 ZFINID:ZDB-GENE-050417-114 Length:432 Species:Danio rerio


Alignment Length:418 Identity:142/418 - (33%)
Similarity:207/418 - (49%) Gaps:90/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TSFRKRTVQKP--IRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLIEEDRFMTHAKVLAK 64
            |||:|:|..|.  |.|||.|....|::.|||...||.||||||.:|::.|:||||:.:::::|.|
Zfish    18 TSFQKKTRSKLVFIPGTRPSVQNGQLLVSSGVSSLDYVIGGGLAVGTLLLVEEDRYDSYSRMLLK 82

  Fly    65 YFLAEGVISKQEIFLGSLDDIPAEMLRRLPRP-LTDQESMEQSEVQAL-GDAGAENGLRIAWRYN 127
            ||||||::...|:||.|..|.|.::::.||.| |.|..||:.||.|:. .|....:.::|||||.
Zfish    83 YFLAEGIVCGHELFLASARDHPDQIMQELPSPILDDVASMKMSEGQSQPNDPDNPDTMKIAWRYQ 147

  Fly   128 DLPLVNSEHA-TAKIGHHFNLMEQMDSMMLYNVKTTLWDDSPKHLDIVIDEEFSKSSSPTTPSLE 191
            :.|.|.:..| :::.||:::..:.||..:|...|              ....:....:|.|..|.
Zfish   148 NQPRVQTALASSSRFGHYYDASKTMDPELLQAAK--------------YHSFYQLQETPVTTGLS 198

  Fly   192 QQPVEDAPPIPGTETAPQEKMPAQEEENSANNNNNNNNNSSSVTSSTKTGSQDSPLQVFHNPRYK 256
            ..|                                                  ||        |.
Zfish   199 SLP--------------------------------------------------SP--------YL 205

  Fly   257 GLLNDIQQLLRNESFVAGTK----NNLCRVCLTSLGSPLWYDEHFGED-------LIKFLTLLMA 310
            .||..||.|::.|.|...|.    .|:.||.|.||||.||.|:...:|       |..||..|..
Zfish   206 ALLKSIQTLIQKEGFDGSTPQLRGRNVLRVGLHSLGSVLWGDDVCCKDNSAHCHALSTFLYALRG 270

  Fly   311 SVRNCNSVCLITMPMHLIAKYDASLVPKIRQLVDYAIELESFAGSERETHPAFKEYSGLLHLHKM 375
            .:|...||.::|:|.|||  ...:::.:|.:|.|.||.||||.|||:||:|.:|:|.|||::.::
Zfish   271 LLRTSLSVAMMTVPSHLI--QSRAVMGRIIRLSDTAIALESFRGSEKETNPLYKDYHGLLYVRQI 333

  Fly   376 SAINTLAVHMPETPDLAFKLRRKKFIIE 403
            ..:|.|...:|:|.||||||:||:|.||
Zfish   334 PRLNCLTSEVPDTKDLAFKLKRKQFTIE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6907NP_001285628.1 PAXNEB 3..436 CDD:283315 141/417 (34%)
elp4XP_009301242.1 PAXNEB 19..361 CDD:283315 139/415 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595662
Domainoid 1 1.000 239 1.000 Domainoid score I2233
eggNOG 1 0.900 - - E1_KOG3949
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H32433
Inparanoid 1 1.050 244 1.000 Inparanoid score I3279
OMA 1 1.010 - - QHG55433
OrthoDB 1 1.010 - - D413334at33208
OrthoFinder 1 1.000 - - FOG0004319
OrthoInspector 1 1.000 - - oto39712
orthoMCL 1 0.900 - - OOG6_103712
Panther 1 1.100 - - LDO PTHR12896
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R393
SonicParanoid 1 1.000 - - X5407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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