DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6907 and elp4

DIOPT Version :9

Sequence 1:NP_001285628.1 Gene:CG6907 / 33775 FlyBaseID:FBgn0031711 Length:437 Species:Drosophila melanogaster
Sequence 2:XP_002938755.1 Gene:elp4 / 100485395 XenbaseID:XB-GENE-991975 Length:408 Species:Xenopus tropicalis


Alignment Length:466 Identity:153/466 - (32%)
Similarity:236/466 - (50%) Gaps:107/466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TSFRKRTVQK--PIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLIEEDRFMTHAKVLAK 64
            |||:::...|  .|.|||.|.|..|::.|:|.|.||.:|||||.:|::.|||||.:.|::.:|.|
 Frog    20 TSFKRKVRGKFPAIPGTRPSVHNGQLLVSTGVPSLDHIIGGGLAVGTLLLIEEDTYGTYSHLLLK 84

  Fly    65 YFLAEGVISKQEIFLGSLDDIPAEMLRRLPRPLTDQESMEQSEVQALGDA-----GAENGLRIAW 124
            |||||||||..|:|:.|.:|.|.:.|:.||.|||| |.:.|::.::..:|     .:::.::|||
 Frog    85 YFLAEGVISGHEVFVASANDDPTDTLQDLPAPLTD-EILRQNDPKSTKEAFGHVEDSQDMMKIAW 148

  Fly   125 RYNDLPLVNS-EHATAKIGHHFNLMEQMDSMMLYNVKTTLWDDSPKHLDIVIDEEFSKSSSPTTP 188
            ||.::|.:.: ...:::.||:::|.:.|...|          .:..|...:              
 Frog   149 RYQNMPKMEALPILSSRFGHYYDLSKTMPLEM----------SAKSHRFFL-------------- 189

  Fly   189 SLEQQPVEDAPPIPGTETAPQEKMPAQEEENSANNNNNNNNNSSSVTSSTKTGSQDSPLQVFHNP 253
                               |..|.|.|:|            |.|.||.:                
 Frog   190 -------------------PHVKPPNQKE------------NVSEVTCN---------------- 207

  Fly   254 RYKGLLNDIQQLLRNESFVAGT----KNNLCRVCLTSLGSPLWYDEHFGED-------LIKFLTL 307
             |..||..||:::..|.:....    ...:.||.:.||||.||.|:....:       |.:||..
 Frog   208 -YNQLLEAIQRVVHQEGYDGSNPQKRPKTVLRVGIESLGSVLWGDDICSHERPENQHSLTRFLYA 271

  Fly   308 LMASVRNCNSVCLITMPMHLIAKYDASLVPKIRQLVDYAIELESFAGSERETHPAFKEYSGLLHL 372
            |...:|...|||:||:|.|||  .:.::..::|.|.|..:.||||.|||.|.:|.:|:|.||||:
 Frog   272 LRGLLRTSLSVCVITVPTHLI--QNEAITTRVRNLSDTVVGLESFIGSEMEANPLYKDYHGLLHV 334

  Fly   373 HKMSAINTLAVHMPETPDLAFKLRRKKFIIEKFHLPPELQES---SAKPDNCISG---LLSNSNA 431
            |::..:|:|...:.:|.||||||:||.|.||:.||||:|.::   |:|.|  ::|   |||:...
 Frog   335 HQIPRLNSLISDVADTKDLAFKLKRKIFAIERLHLPPDLSDTVSRSSKQD--LAGSAKLLSSGCG 397

  Fly   432 TAS-----LDF 437
            .|:     |||
 Frog   398 PAAGGQKHLDF 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6907NP_001285628.1 PAXNEB 3..436 CDD:283315 149/462 (32%)
elp4XP_002938755.1 PAXNEB 29..408 CDD:368529 148/455 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 182 1.000 Domainoid score I3405
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H32433
Inparanoid 1 1.050 185 1.000 Inparanoid score I3823
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D413334at33208
OrthoFinder 1 1.000 - - FOG0004319
OrthoInspector 1 1.000 - - oto102735
Panther 1 1.100 - - LDO PTHR12896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5407
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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