DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps52 and VPS52

DIOPT Version :9

Sequence 1:NP_608931.1 Gene:Vps52 / 33774 FlyBaseID:FBgn0031710 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_072047.4 Gene:VPS52 / 6293 HGNCID:10518 Length:723 Species:Homo sapiens


Alignment Length:660 Identity:335/660 - (50%)
Similarity:487/660 - (73%) Gaps:11/660 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LDNEEVREILKNTTDLRQYSRQIEKEFKEVENKSIEDYIAESQNIANLHNQINDCDDVLERMENM 77
            |::|.|:|.||...|||.||:|:|.|.:::|.|||.|||.||:|||:|||||..||.||||||.|
Human    65 LEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQM 129

  Fly    78 LMSFQSVLNNISTEITQLQRKSVSMSLQLTNRQSVKAQLSQFIEDMAVSEEMINIIMETPVTERD 142
            |.:|||.|::||:||..||.:|.:|:::|.|||:|:.:|.:.::.:.|...::..|:|.||||..
Human   130 LGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPR 194

  Fly   143 FSTQLNVLNHKLSLVKELSFKESKSTSDVSDVLQKLRLKAMAKIRSYLLEQIYKFRKPMTNYQIP 207
            |..||..|:.|.:.|:|...:.:.:.:||..||.:||:||:.|||.::|::||.|||||||||||
Human   195 FLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIP 259

  Fly   208 QNAMLKHKFFFEFILSNERHVAQEICSEYIDTMGKIYYSYFKSYSTRLTSLKFEESCTKDDLMGI 272
            |.|:||::||::|:|.|||..|:||..||::|:.|||.||::||..||..:::||...||||||:
Human   260 QTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGV 324

  Fly   273 EDNASKGLFSKTTSLKHKSTIFTIGKRGDILN-QQLEAPIIVPHAQLK--NRYTAEALFRSEQYA 334
            ||.|.||.||| .||:.::||||:|.||.::: .:|||||:|||...:  .||..||||||:.||
Human   325 EDTAKKGFFSK-PSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYA 388

  Fly   335 LVDNACREYLFVTEFFMVRGTQAQDLFNQIMGKTLTLMIKNLETSIHDCFDTIAMFLCIHLIFRY 399
            |:||:||||||:.|||:|.|..|.|||:.:||:||::.:|:|::.:.||:|.||:|||||::.|:
Human   389 LLDNSCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLKHLDSYLADCYDAIAVFLCIHIVLRF 453

  Fly   400 QLMCHKRCVPALDKYWDSLQAVIWPRFELVFRLNIQSIHDCDPTKF-NKELGPHYITRRYAEFSA 463
            :.:..||.|||||:||:.:.|::||||||:..:|:||:...||.:. ..:..||||||||||||:
Human   454 RNIAAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSS 518

  Fly   464 AIVGISEHFPNELVSRLLLELQNEVECFILRMAAIFPTRKDQLIYLINNYDLVLGVLMEHTRDNS 528
            |:|.|::..|||...:||.:||.|||.|:||:||.|.:||:||::||||||::||||||...|:|
Human   519 ALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDS 583

  Fly   529 KEAEAFREQLNSRSAEYVEEILAPHFGGIIQFVKECEHFFEKEQMDELRKQERRSLALVASFSAN 593
            ||.|:|::.||:|:.|::||:|:|.|||::.||||.|...|:.|.:.||.:|.|...|:..|.::
Human   584 KEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSS 648

  Fly   594 WKKSLEELNREVLLSFPSLLTGSQLLQLALASLVQYYHRFHKLLT-PN-----ARAQLTNIHVVM 652
            ||.|:|.|:::|:.||.:...|:.::|.||..|:|.|||||::|: |.     |||:|.|||.:|
Human   649 WKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLM 713

  Fly   653 VEIKKYKSNY 662
            ||:||:|.|:
Human   714 VELKKHKPNF 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps52NP_608931.1 Vps52 42..546 CDD:282044 266/507 (52%)
VPS52NP_072047.4 Vps52 94..601 CDD:282044 266/507 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140692
Domainoid 1 1.000 550 1.000 Domainoid score I252
eggNOG 1 0.900 - - E1_KOG1961
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5756
Inparanoid 1 1.050 686 1.000 Inparanoid score I707
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54348
OrthoDB 1 1.010 - - D139156at33208
OrthoFinder 1 1.000 - - FOG0003722
OrthoInspector 1 1.000 - - oto90984
orthoMCL 1 0.900 - - OOG6_101848
Panther 1 1.100 - - LDO PTHR14190
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1656
SonicParanoid 1 1.000 - - X3644
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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