DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps52 and Vps52

DIOPT Version :10

Sequence 1:NP_608931.1 Gene:Vps52 / 33774 FlyBaseID:FBgn0031710 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_318824.3 Gene:Vps52 / 1279148 VectorBaseID:AGAMI1_007726 Length:660 Species:Anopheles gambiae


Alignment Length:652 Identity:518/652 - (79%)
Similarity:594/652 - (91%) Gaps:0/652 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQLDNEEVREILKNTTDLRQYSRQIEKEFKEVENKSIEDYIAESQNIANLHNQINDCDDVLERME 75
            ||::::||:||||..||||||:.|||||||||||:||:|||.||||||||||||.:..::|||||
Mosquito     9 EQIEDDEVQEILKTGTDLRQYAAQIEKEFKEVENRSIDDYIKESQNIANLHNQIGNTSNILERME 73

  Fly    76 NMLMSFQSVLNNISTEITQLQRKSVSMSLQLTNRQSVKAQLSQFIEDMAVSEEMINIIMETPVTE 140
            :|||..|..|||||||||.||:||||||:|||||||::||:|||||||||.|||::.||::||||
Mosquito    74 SMLMDIQDALNNISTEITSLQKKSVSMSVQLTNRQSIRAQISQFIEDMAVPEEMVSCIMDSPVTE 138

  Fly   141 RDFSTQLNVLNHKLSLVKELSFKESKSTSDVSDVLQKLRLKAMAKIRSYLLEQIYKFRKPMTNYQ 205
            ::|...||.|||||:|:|||:||||||:.|||||||||::|||:|:|.||:||||||||||.|||
Mosquito   139 KEFVAHLNELNHKLNLMKELNFKESKSSQDVSDVLQKLKIKAMSKLRLYLMEQIYKFRKPMANYQ 203

  Fly   206 IPQNAMLKHKFFFEFILSNERHVAQEICSEYIDTMGKIYYSYFKSYSTRLTSLKFEESCTKDDLM 270
            ||||||||:||||||||||||.||||||:||:|||.||||||||||||||.||||||:.:|||||
Mosquito   204 IPQNAMLKYKFFFEFILSNERTVAQEICNEYVDTMSKIYYSYFKSYSTRLGSLKFEEAVSKDDLM 268

  Fly   271 GIEDNASKGLFSKTTSLKHKSTIFTIGKRGDILNQQLEAPIIVPHAQLKNRYTAEALFRSEQYAL 335
            |::|:..||:||||:|||:|||:|:||.||::|||||||||||||||.|.||..|||||||||||
Mosquito   269 GLDDSGPKGIFSKTSSLKNKSTVFSIGDRGEVLNQQLEAPIIVPHAQQKFRYAYEALFRSEQYAL 333

  Fly   336 VDNACREYLFVTEFFMVRGTQAQDLFNQIMGKTLTLMIKNLETSIHDCFDTIAMFLCIHLIFRYQ 400
            ||||||||||||:||:|||.|||:|||||||||..|:||||||.:.||:||||:||||.|.||||
Mosquito   334 VDNACREYLFVTDFFIVRGAQAQELFNQIMGKTTALLIKNLETYVQDCYDTIALFLCIQLCFRYQ 398

  Fly   401 LMCHKRCVPALDKYWDSLQAVIWPRFELVFRLNIQSIHDCDPTKFNKELGPHYITRRYAEFSAAI 465
            ||||||||||||||||:|.||||||||.|||:|||||.|||||||.||.||||||||||||||||
Mosquito   399 LMCHKRCVPALDKYWDNLHAVIWPRFEQVFRMNIQSIQDCDPTKFPKETGPHYITRRYAEFSAAI 463

  Fly   466 VGISEHFPNELVSRLLLELQNEVECFILRMAAIFPTRKDQLIYLINNYDLVLGVLMEHTRDNSKE 530
            |||:|:|||||||.:|||||.||:||:|||||||.|||:||||||||||||||||||.|||||||
Mosquito   464 VGITENFPNELVSHMLLELQEEVKCFMLRMAAIFTTRKEQLIYLINNYDLVLGVLMERTRDNSKE 528

  Fly   531 AEAFREQLNSRSAEYVEEILAPHFGGIIQFVKECEHFFEKEQMDELRKQERRSLALVASFSANWK 595
            ||||||.|::|||||||||||||.||||||||:||...:|||.:||::||||||.|||:||||||
Mosquito   529 AEAFRELLSTRSAEYVEEILAPHLGGIIQFVKDCEQMRDKEQTEELKRQERRSLQLVANFSANWK 593

  Fly   596 KSLEELNREVLLSFPSLLTGSQLLQLALASLVQYYHRFHKLLTPNARAQLTNIHVVMVEIKKYKS 660
            ||||||||||.||||||||||||||||||.||||||:|:|||||||||||.||||:|:|:|||||
Mosquito   594 KSLEELNREVFLSFPSLLTGSQLLQLALAQLVQYYHKFYKLLTPNARAQLVNIHVIMIEVKKYKS 658

  Fly   661 NY 662
            |:
Mosquito   659 NF 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps52NP_608931.1 Vps52 42..546 CDD:282044 399/503 (79%)
Vps52XP_318824.3 None

Return to query results.
Submit another query.