DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7382 and tim21

DIOPT Version :10

Sequence 1:NP_608929.1 Gene:CG7382 / 33772 FlyBaseID:FBgn0031708 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_596833.1 Gene:tim21 / 2539981 PomBaseID:SPBC1289.09 Length:223 Species:Schizosaccharomyces pombe


Alignment Length:224 Identity:53/224 - (23%)
Similarity:89/224 - (39%) Gaps:41/224 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RQEASRDGGGSLQR---SQDNTQVSTDVRPIGE-------KIKENTKTASYTA------------ 80
            ||.|:|.....:||   |..:..::...:|..|       |...|......||            
pombe     7 RQSATRFSSALVQRRLYSLASDSLNKQRKPQEEGRLARIFKDPSNKAWKDLTAPQKAYRTSANIG 71

  Fly    81 ---IIIAGLGVTCVMFFAIFRELFSSESPNNIYADALRRVVEDPRVQDAIGAPIKGFGETSRRGR 142
               |:|.|.||..::.:|:...::..|:.....|..|.:..|:.|.  ..|..:|..||.:...|
pombe    72 NFSIVIFGGGVFGLIIYALVTSIWKGEAHYGDEAFELLKANEECRY--VFGDHMKALGEATHPLR 134

  Fly   143 RQHVAHSS--YERNGKPHMRMQFYVQGLRNKATV--QLESRRSDSGKLEYRYLFVQLDHYPRTTI 203
            |.|...:|  ::.:|..|:.:||::.|...|..|  :|.:.:.|   .::.||||.:.:|.:..|
pombe   135 RTHGILTSRVWDHHGVEHLVLQFHLIGNERKGHVFGRLVNVQGD---YKWEYLFVDVANYGKIII 196

  Fly   204 ILEDNRAFDPTPEPASAGSSFGNLALMSN 232
                   ||.|........:||....:.|
pombe   197 -------FDHTNSVRQQHKNFGLWGSLKN 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7382NP_608929.1 TIM21 68..209 CDD:311963 38/159 (24%)
tim21NP_596833.1 TIM21 62..200 CDD:311963 36/149 (24%)

Return to query results.
Submit another query.