DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and TBX18

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001073977.1 Gene:TBX18 / 9096 HGNCID:11595 Length:607 Species:Homo sapiens


Alignment Length:483 Identity:181/483 - (37%)
Similarity:233/483 - (48%) Gaps:74/483 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NSGGAVAQTASAESQLNTSST----SSQGRC-------STPPQSPG--TEDSEERL-----TPEP 167
            :.|.|:...|.|.|....|..    .:.|.|       ::|..|||  .:.|..|.     ||.|
Human    70 DEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKGSPARSLARPGTPLP 134

  Fly   168 VQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQP 232
            ..:||::              .|:..|||.|||::||||||||.||||||.:||..||    :.|
Human   135 SPQAPRV--------------DLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISG----LDP 181

  Fly   233 ADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVK 297
            ..:|.:.|||:|:|:|||||.||.|.|:|||.||...|.|:|.|||||.|.|...:|||||:|:|
Human   182 HQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLK 246

  Fly   298 LTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSI-PSNPKELQDLDHKTYVFPETVFTAVTAYQ 361
            |||||:|..|.|:|:|||:||||:|::|...|..: |..|....: ..|.:.|||||||.|||||
Human   247 LTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGE-GVKAFSFPETVFTTVTAYQ 310

  Fly   362 NQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQL-RSPLRLFPDPLMQQFAAQGDPSS 425
            ||.||:||||.||||||||||.|    :|..:|||:..... |..||......:.....||:.||
Human   311 NQQITRLKIDRNPFAKGFRDSGR----NRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQGNASS 371

  Fly   426 MALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFLAS 490
            ..|       ||..|...|...   |.:...::.::         .|||: .....||.:  ||.
Human   372 STL-------LQGTGNGVPATH---PHLLSGSSCSS---------PAFHL-GPNTSQLCS--LAP 414

  Fly   491 ANQQAAAAQAAAQAQAQAQAAAA----AMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFS 551
            |:..|.|.......:.....|..    ...|..|..||.|.|....:||.|.:..|.......||
Human   415 ADYSACARSGLTLNRYSTSLAETYNRLTNQAGETFAPPRTPSYVGVSSSTSVNMSMGGTDGDTFS 479

  Fly   552 PYQLP-----GGQGPPSSAAGSPPAVNA 574
            ..|..     .|..|........|:.||
Human   480 CPQTSLSMQISGMSPQLQYIMPSPSSNA 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 115/199 (58%)
TBX18NP_001073977.1 Engrailed homology 1 repressor. /evidence=ECO:0000305 18..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..141 19/70 (27%)
Nuclear localization signal. /evidence=ECO:0000305 36..40
TBOX 139..334 CDD:238106 117/217 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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