DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx19

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_114394.1 Gene:Tbx19 / 83993 MGIID:1891158 Length:446 Species:Mus musculus


Alignment Length:464 Identity:131/464 - (28%)
Similarity:198/464 - (42%) Gaps:127/464 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 KPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSK 248
            |.:|..||...||.||.::..|||:||.||||||.:::|.:|    :.|...|::|:|.:..||.
Mouse    37 KQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTG----LDPNAMYSLLLDFVRTDSH 97

  Fly   249 RYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNS 313
            |::|.  ...|:.|||.:.:..:.:|.|||||.......|..|||.||||| |:::..|||:|||
Mouse    98 RWKYV--NGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLT-NKLNGGGQIMLNS 159

  Fly   314 MHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKG 378
            :|:|:|::|:||:.....:..|..           ||||.|.|||||||:.||.|||..|||||.
Mouse   160 LHKYEPQVHIVRVGGAHRMVMNCS-----------FPETQFIAVTAYQNEEITALKIKYNPFAKA 213

  Fly   379 FRDSSRLTDFDRDPMEALLLEQ--------------------------QLRSPLRL--------- 408
            |.|:...... :|..||:...|                          |..:||.|         
Mouse   214 FLDAKERNHL-KDVPEAISESQHVTYSHLGGWILSNPDGVCTAANSNYQYATPLPLPAPHTHHGC 277

  Fly   409 -------------FPDPLMQQFAAQGDPSSMALFEKARQHLQMFGG--------NSPYAQLMMPQ 452
                         :|...|.    :....|:.|.|.:..:||:|.|        ::|:|.::   
Mouse   278 EHYAGLRGHRQAPYPSAYMH----RNHSPSVNLIESSSNNLQVFSGPDSWTSLSSTPHASIL--- 335

  Fly   453 MYQAAAAAAGP----PPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAA 513
               :...:.||    |.|.|.|         |.....|          ....|:.::..|..:..
Mouse   336 ---SVPHSNGPINPGPSPYPCL---------WTISNGG----------GGPVASGSEVHASTSGT 378

  Fly   514 AMAANRTPPPPPTASTPSS-------TSS-----GSPS-PDMRPRQYQRFSPYQLPGGQGPPSSA 565
            .:..|      |..::|||       ||:     |.|| ..:....:...:.:.|||..||..:.
Mouse   379 ILLGN------PAVTSPSSLLPTQATTSAGVEVLGEPSLTSIAVSTWTAVASHPLPGWGGPGGAG 437

  Fly   566 AGSPPAVNA 574
            ..|..::::
Mouse   438 RHSSSSLDS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 85/198 (43%)
Tbx19NP_114394.1 TBOX 39..221 CDD:214656 85/199 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831466
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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