DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and EOMES

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001265111.1 Gene:EOMES / 8320 HGNCID:3372 Length:705 Species:Homo sapiens


Alignment Length:719 Identity:178/719 - (24%)
Similarity:243/719 - (33%) Gaps:263/719 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CNGVPAAPAAPNASGQTTTTASKSAAGSATDFSIAAIMAREDASSRESSIRSASPISVEDEVDVD 74
            |..|...|||.:| |......|.:.||.|  |:.||.:|:......    |..||          
Human    61 CEAVSGEPAAASA-GAPAAMLSDTDAGDA--FASAAAVAKPGPPDG----RKGSP---------- 108

  Fly    75 VVDCSDAEEPPTKARRLNHHQHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTASAESQLNTS 139
               |.:.|.|...|                                 :..|.|..|:|.::.:..
Human   109 ---CGEEELPSAAA---------------------------------AAAAAAAAAAATARYSMD 137

  Fly   140 STSSQGRCSTPPQSPGTEDSEE----RLTP---------EPVQKAPK------------------ 173
            |.||:....   ||||.:.||.    .|.|         .||..||.                  
Human   138 SLSSERYYL---QSPGPQGSELAAPCSLFPYQAAAGAPHGPVYPAPNGARYPYGSMLPPGGFPAA 199

  Fly   174 ------------------------------------------------IVGSCNCDDLKPV---- 186
                                                            ..|||.  .|..:    
Human   200 VCPPGRAQFGPGAGAGSGAGGSSGGGGGPGTYQYSQGAPLYGPYPGAAAAGSCG--GLGGLGVPG 262

  Fly   187 -----QCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMD 246
                 ..:|..:.||.:||...|||||||.||||||.:..:.:|    :.|...|.|.::::..|
Human   263 SGFRAHVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNING----LNPTAHYNVFVEVVLAD 323

  Fly   247 SKRYRYAYHRSAWLVAGKADPAPPA-RLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNG--- 307
            ...:|  :....|:..||||..... ::|.||:||.:.....:|.|||.|:|||||:...|.   
Human   324 PNHWR--FQGGKWVTCGKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQ 386

  Fly   308 QIVLNSMHRYQPRIHLVRLSH-GQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKID 371
            .|||.|:|:||||:|:|.::. |....:.|.:.|     |:.|.||.|.|||||||..||:||||
Human   387 MIVLQSLHKYQPRLHIVEVTEDGVEDLNEPSKTQ-----TFTFSETQFIAVTAYQNTDITQLKID 446

  Fly   372 SNPFAKGFRDS--SRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDPSSMALFEKARQ 434
            .|||||||||:  |..|..:.|               ||.|.|       ...|.|..:....|.
Human   447 HNPFAKGFRDNYDSMYTASEND---------------RLTPSP-------TDSPRSHQIVPGGRY 489

  Fly   435 HLQMF---------------GGNSPYAQ---LMMPQMYQAAAAAAGP------PPPPPGLGAFHM 475
            .:|.|               .|.....|   |:.||  |:...|..|      |...||.....:
Human   490 GVQSFFPEPFVNTLPQARYYNGERTVPQTNGLLSPQ--QSEEVANPPQRWLVTPVQQPGTNKLDI 552

  Fly   476 --FQQQWPQLTA---GFLASANQQA------------AAAQAAAQAQAQAQAAAAAMAANRTPP- 522
              ::.::...|.   |..:...|.:            |.|....:...|.:.||.....:||.| 
Human   553 SSYESEYTSSTLLPYGIKSLPLQTSHALGYYPDPTFPAMAGWGGRGSYQRKMAAGLPWTSRTSPT 617

  Fly   523 ----------------------PPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQGPPSSA 565
                                  .||:..:..|..||..:...:.|   |.||..        ||.
Human   618 VFSEDQLSKEKVKEEIGSSWIETPPSIKSLDSNDSGVYTSACKRR---RLSPSN--------SSN 671

  Fly   566 AGSP 569
            ..||
Human   672 ENSP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 86/214 (40%)
EOMESNP_001265111.1 TBOX 267..460 CDD:238106 86/203 (42%)
T-box_assoc 482..703 CDD:292794 38/207 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141535
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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