DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and eomesb

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001077044.1 Gene:eomesb / 799447 ZFINID:ZDB-GENE-070318-1 Length:534 Species:Danio rerio


Alignment Length:403 Identity:117/403 - (29%)
Similarity:177/403 - (43%) Gaps:80/403 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 QCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYR 251
            |.:|..:.||.:||...|||||||.||||||.:..:.:|    :..:..|.|.::|:..|...:|
Zfish   140 QVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNMTG----LSLSAHYNVFVEIVLADPNHWR 200

  Fly   252 YAYHRSAWLVAGKADPAPPA-RLYAHPDSPFSCEALRKQVISFEKVKLTNNE---MDKNGQIVLN 312
              :....|:..||||..... ::|.||:||.:.....:|.|||.|:|||||:   ::.:..|||.
Zfish   201 --FQGGKWVTCGKADNNMQGNKIYMHPESPNTGAHWMRQEISFGKLKLTNNKGANINTSQMIVLQ 263

  Fly   313 SMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAK 377
            |:|:||||:|:|.:|..:|       .:|.:.:.:.|||..|.|||||||..||:||||.|||||
Zfish   264 SLHKYQPRLHIVEVSDDRS-------ERDSNTQIFSFPENQFIAVTAYQNTDITQLKIDHNPFAK 321

  Fly   378 GFRDS----------SRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQ-QF-----------AAQ 420
            ||||:          .|||....|...|    ||:....|....|.:| ||           ::.
Zfish   322 GFRDNYDSMYTLPDRERLTPSPADSPRA----QQMVPNARYAVQPFLQEQFSSLTQRSVTQPSSV 382

  Fly   421 GDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTA 485
            .||:...|..:....|::......|:..::|..:::..                 .|..:|....
Zfish   383 EDPAQRWLISQNSSKLELTAYEGEYSSSLLPYSFKSLP-----------------LQSYYPDTAF 430

  Fly   486 GFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRF 550
            .:                   ..:.:|.:....:.|...|.:..||.|.. |..|:....:...|
Zfish   431 SW-------------------GTRVSAGSSFPRKLPSGLPWSPRPSPTDF-SEDPEKAREENSPF 475

  Fly   551 SPYQLPGGQGPPS 563
            ...:.|.....||
Zfish   476 CWMEKPSDAAEPS 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 85/210 (40%)
eomesbNP_001077044.1 TBOX 139..329 CDD:238106 85/201 (42%)
T-box_assoc 351..532 CDD:292794 26/175 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574506
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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