DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx18

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_076303.3 Gene:Tbx18 / 76365 MGIID:1923615 Length:613 Species:Mus musculus


Alignment Length:613 Identity:202/613 - (32%)
Similarity:272/613 - (44%) Gaps:163/613 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSIAAIMAREDASSRESSIRSASPISVEDEVDVDVVD-------------CSDAEE----PPTKA 88
            ||:.|::..|.....:...|..:    .:|....|.|             ||:|:|    ||..|
Mouse    20 FSVEALIGAEKQQQLQKKRRKLA----TEEAAGAVEDAGCSRSGGAGEHGCSEADEEAAAPPPAA 80

  Fly    89 RRLNHHQHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTA--SAESQLNTSSTSSQGRC---- 147
                                               ||.:..|  .|:::.:..|..:.|.|    
Mouse    81 -----------------------------------GAASGPARSCADAERSCGSRGAAGSCEDGF 110

  Fly   148 ---STPPQSPGTEDSEERL-------TPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDL 202
               ::|..|||.......:       ||.|..:||::              .|:..|||.|||::
Mouse   111 LQGASPLASPGGSPKGSPVPGLARPGTPLPAPQAPRV--------------DLQGAELWKRFHEI 161

  Fly   203 GTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADP 267
            ||||||||.||||||.:||..||    :.|..:|.:.|||:|:|:|||||.||.|.|:|||.||.
Mouse   162 GTEMIITKAGRRMFPAMRVKISG----LDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADS 222

  Fly   268 APPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSI 332
            ..|.|:|.|||||.|.|...:|||||:|:||||||:|..|.|:|:|||:||||:|::|...|..:
Mouse   223 PVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDL 287

  Fly   333 -PSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEAL 396
             |..|....: ..|.:.|||||||.|||||||.||:||||.||||||||||.|    :|..:|||
Mouse   288 SPIKPVPSGE-GVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR----NRMGLEAL 347

  Fly   397 LLEQQL-RSPLRLFPDPLMQQFAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAA 460
            :..... |..||......:.....||:.||.||       ||..|...|...   |.:...::.:
Mouse   348 VESYAFWRPSLRTLTFEDIPGIPKQGNTSSSAL-------LQGTGNAVPATH---PHLLSGSSCS 402

  Fly   461 AGPPPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAA-----QAQAQAQAAAAAMAANRT 520
            :         .|||: .....||.:  ||.|:..|.|....|     .:.|:..:.....::...
Mouse   403 S---------PAFHL-GPNTSQLCS--LAPADYSACARSGLALNRYSTSLAETYSRLTNQSSETF 455

  Fly   521 PPPPPTASTPSSTS-SGSPSPDMR-----------PR-----QYQRFSP---YQLPGGQGPPSSA 565
            .||    .|||..| |.:||.:|.           |:     |....||   |.:|...|...:|
Mouse   456 APP----RTPSYVSVSSNPSVNMSMGGTDGDTFSCPQTSLSMQISGMSPQLQYIMPSPSGNAFAA 516

  Fly   566 ------------AGSPPAV---NASRSP 578
                        ..||.|:   |.|.||
Mouse   517 NQTHQSSYNTFRLHSPCALYGYNFSTSP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 113/196 (58%)
Tbx18NP_076303.3 Engrailed homology 1 repressor. /evidence=ECO:0000305|PubMed:17584735 18..28 3/7 (43%)
Nuclear localization signal. /evidence=ECO:0000305|PubMed:17584735 36..40 0/3 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..94 15/95 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..145 7/30 (23%)
T-box_TBX18_like 142..336 CDD:410325 114/212 (54%)

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