DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and TBX15

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_005271218.1 Gene:TBX15 / 6913 HGNCID:11594 Length:635 Species:Homo sapiens


Alignment Length:531 Identity:187/531 - (35%)
Similarity:261/531 - (49%) Gaps:110/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QTASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLET 192
            |:..::|::.|..||    ||.   |..|:.:.....|.|...:          .::.:|..|:.
Human    72 QSTGSDSEVLTERTS----CSF---STHTDLASGAAGPVPAAMS----------SMEEIQVELQC 119

  Fly   193 KELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRS 257
            .:||.||||:||||||||.||||||.:||..:|    :.|..:|.:.|||:|:|:|||||.||.|
Human   120 ADLWKRFHDIGTEMIITKAGRRMFPAMRVKITG----LDPHQQYYIAMDIVPVDNKRYRYVYHSS 180

  Fly   258 AWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIH 322
            .|:|||.||...|.|:|.||||..|.:...:||:||:|:||||||:|..|.|:|:|||:||||:|
Human   181 KWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQPRVH 245

  Fly   323 LVRLSHGQSI-PSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLT 386
            ::|......: |:.|..:.| ..||:.|||||||.|||||||.||:||||.||||||||||.|  
Human   246 VIRKDFSSDLSPTKPVPVGD-GVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR-- 307

  Fly   387 DFDRDPMEALLLEQQL-RSPLR--LFPD--PLMQQFA----AQG--------DPSSMALFEKARQ 434
              :|..:||::..... |.|:|  .|.|  .:.:|.|    :||        :..::.|:|:...
Human   308 --NRTGLEAIMETYAFWRPPVRTLTFEDFTTMQKQQASKKTSQGYTVNQHSSETDAIELYERRVW 370

  Fly   435 HLQMFG--GNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQW------PQLTAGFLASA 491
            .::..|  |.||...........|::....|...||   .||:....:      .||....|:..
Human   371 LMERRGSTGTSPTTSSTGTPSPSASSHLLSPSCSPP---TFHLAPNTFNVGCRESQLCNLNLSDY 432

  Fly   492 NQQAAAAQAAAQA----------QAQAQAAAAAMAA-----NRTP------PPPPT--------- 526
            ...|.:..||.|:          :.|:...:|...:     .|||      |.||:         
Human   433 PPCARSNMAALQSYPGLSDSGYNRLQSGTTSATQPSETFMPQRTPSLISGIPTPPSLPGNSKMEA 497

  Fly   527 -----ASTPSS------------TSSGSP----SPDMRPRQYQRFS---PYQLPGGQGPPS-SAA 566
                 .|.|:|            :||.||    ...|:...|..||   ||.|.|...|.| ..|
Human   498 YGGQLGSFPTSQFQYVMQAGNAASSSSSPHMFGGSHMQQSSYNAFSLHNPYNLYGYNFPTSPRLA 562

  Fly   567 GSPPAVNASRS 577
            .||..::||:|
Human   563 ASPEKLSASQS 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 113/199 (57%)
TBX15XP_005271218.1 TBOX 113..308 CDD:238106 114/203 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141515
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.