DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and TBX6

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_004599.2 Gene:TBX6 / 6911 HGNCID:11605 Length:436 Species:Homo sapiens


Alignment Length:427 Identity:146/427 - (34%)
Similarity:197/427 - (46%) Gaps:89/427 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 PQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRM 215
            |.:.||         ||...||:.:.|     |..|...||.:|||..|..:||||||||.||||
Human    70 PPAMGT---------EPAPSAPEALHS-----LPGVSLSLENRELWKEFSSVGTEMIITKAGRRM 120

  Fly   216 FPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSP 280
            ||..|||.:|    :.|..||..|:|:||:|..|||:...|  |..:|||:|..|.|:|.|||||
Human   121 FPACRVSVTG----LDPEARYLFLLDVIPVDGARYRWQGRR--WEPSGKAEPRLPDRVYIHPDSP 179

  Fly   281 FSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLS-----HGQSIPSNPKELQ 340
            .:.....:|.:||.:|||||:.:|.:|.::|:|||:|||||||||.:     |...:.|      
Human   180 ATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRAAQLCSQHWGGMAS------ 238

  Fly   341 DLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSP 405
                  :.||||.|.:||||||..||:|||.:||||||||::.|....:||..    ::::||. 
Human   239 ------FRFPETTFISVTAYQNPQITQLKIAANPFAKGFRENGRNCKRERDAR----VKRKLRG- 292

  Fly   406 LRLFPDPLMQQFAAQGD----PSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPP 466
                |:|...:....||    |....|           ||:...:.   |:...|...|...|.|
Human   293 ----PEPAATEAYGSGDTPGGPCDSTL-----------GGDIRESD---PEQAPAPGEATAAPAP 339

  Fly   467 PPG----------LGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTP 521
            ..|          ..|||......|..:..|..:.:...:|..:||..:....:..:..     |
Human   340 LCGGPSAEAYLLHPAAFHGAPSHLPTRSPSFPEAPDSGRSAPYSAAFLELPHGSGGSGY-----P 399

  Fly   522 PPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGG 558
            ..||..........|.|.|          .||..|||
Human   400 AAPPAVPFAPHFLQGGPFP----------LPYTAPGG 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 99/203 (49%)
TBX6NP_004599.2 TBOX 90..277 CDD:238106 99/204 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..339 19/90 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..379 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141506
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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