DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx10

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001413973.1 Gene:Tbx10 / 688822 RGDID:1584144 Length:344 Species:Rattus norvegicus


Alignment Length:431 Identity:148/431 - (34%)
Similarity:191/431 - (44%) Gaps:143/431 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 EPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQI 230
            ||..:.||      ...:..|...||.|.||:.|:.||||||:||.|||||||.:|...|    :
  Rat    10 EPTGQGPK------NPRVSSVMVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPTFQVKIVG----M 64

  Fly   231 QPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEK 295
            .....||:|||.||:|.||||||:|.||||||||||||.|.|::.|||||.......:|::||:|
  Rat    65 DTLADYALLMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDK 129

  Fly   296 VKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAY 360
            :|||||.||.||.|:||||||||||.|:|.:...:......:|    :.|::||.||.|||||||
  Rat   130 LKLTNNLMDDNGHIILNSMHRYQPRFHVVFVDPRKDSARYAQE----NFKSFVFMETQFTAVTAY 190

  Fly   361 QNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDPSS 425
            ||..||:|||.|||||||||::                                       ||.|
  Rat   191 QNHRITQLKIASNPFAKGFREA---------------------------------------DPDS 216

  Fly   426 MALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFLA- 489
                                                                  ||......|: 
  Rat   217 ------------------------------------------------------WPATPRPLLSI 227

  Fly   490 SANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSG-SPSPDM-------RPRQ 546
            .|..:::......:..|:.:...:..:|:|       ..||:.|... .|:||:       ||..
  Rat   228 PARSRSSLGPCLLKGSAEREKDTSGTSASR-------PRTPTQTHHQLLPAPDVLLAPATYRPLP 285

  Fly   547 YQ---------------RFSPYQLP-----GGQGPPSSAAG 567
            ||               |.:||.||     |.|..|:.|||
  Rat   286 YQNLYPGSPSHAGTSRARLAPYPLPNISTAGNQEDPTFAAG 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 113/195 (58%)
Tbx10NP_001413973.1 None

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