DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and TBXT

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001353214.1 Gene:TBXT / 6862 HGNCID:11515 Length:436 Species:Homo sapiens


Alignment Length:483 Identity:149/483 - (30%)
Similarity:206/483 - (42%) Gaps:112/483 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 SPGTEDSEERL----------TPEPVQKAPKIVGSCNCDDL-KPVQCHLETKELWDRFHDLGTEM 206
            |||||.:.:.|          ....:|     .||...|.. :.::..||..|||.||.:|..||
Human     3 SPGTESAGKSLQYRVDHLLSAVENELQ-----AGSEKGDPTERELRVGLEESELWLRFKELTNEM 62

  Fly   207 IITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPA 271
            |:||.||||||.::|:.||    :.|...|:.|:|.:..|:.|::|.  ...|:..||.:|..|:
Human    63 IVTKNGRRMFPVLKVNVSG----LDPNAMYSFLLDFVAADNHRWKYV--NGEWVPGGKPEPQAPS 121

  Fly   272 RLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNP 336
            .:|.|||||.......|..:||.||||| |:::..|||:|||:|:|:||||:||:...|.:.:  
Human   122 CVYIHPDSPNFGAHWMKAPVSFSKVKLT-NKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMIT-- 183

  Fly   337 KELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQ 401
                     ::.||||.|.|||||||:.||.|||..|||||.|.|:...:|.          ::.
Human   184 ---------SHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDH----------KEM 229

  Fly   402 LRSPLRLFPDPLMQQFAAQGD---PSSMALFEKARQHLQMFGG---------------------- 441
            :..|    .|.....::..|.   |.:..|...|..|.| |||                      
Human   230 MEEP----GDSQQPGYSQSGGWLLPGTSTLCPPANPHPQ-FGGALSLPSTHSCDRYPTLRSHRSS 289

  Fly   442 --NSPYAQLMMPQMYQAAAAAA-------------GPPPPPPGLGAFH-----MFQQQWPQLTAG 486
              .||||.......|...:.|.             |.|..|..|...|     ....|:|.|   
Human   290 PYPSPYAHRNNSPTYSDNSPACLSMLQSHDNWSSLGMPAHPSMLPVSHNASPPTSSSQYPSL--- 351

  Fly   487 FLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSP-------SPDMRP 544
            :..|.......:||||.:............|:.||...| .|.||  |||||       :.|:..
Human   352 WSVSNGAVTPGSQAAAVSNGLGAQFFRGSPAHYTPLTHP-VSAPS--SSGSPLYEGAAAATDIVD 413

  Fly   545 RQYQRFSPYQLPGGQGPPSSAAGSPPAV 572
            .||...:..:|.....|.     |||::
Human   414 SQYDAAAQGRLIASWTPV-----SPPSM 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 88/198 (44%)
TBXTNP_001353214.1 T-box 44..219 CDD:307177 87/192 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..309 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141525
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.