DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx3

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001027524.1 Gene:tbx3 / 613116 XenbaseID:XB-GENE-1018231 Length:701 Species:Xenopus tropicalis


Alignment Length:468 Identity:155/468 - (33%)
Similarity:217/468 - (46%) Gaps:97/468 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 GAVAQ------TASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTP-EPVQKAPKIVGSCNCD 181
            ||:|:      ..:||:.:..||...|......|.        :.|.| |.|:..||:       
 Frog    57 GALAKPIMDQLVGAAETGIPFSSLGHQAAAHLRPL--------KTLEPEEEVEDDPKV------- 106

  Fly   182 DLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMD 246
                   |||.|:||::||..||||:|||:||||||..:|..||    :....:|.:||||:..|
 Frog   107 -------HLEGKDLWEQFHKRGTEMVITKSGRRMFPPFKVRCSG----LDKKAKYILLMDIVAAD 160

  Fly   247 SKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVL 311
            ..||:  :|.|.|:|||||||..|.|:|.|||||.:.|....:|::|.|:|||||..||:|..:|
 Frog   161 DCRYK--FHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTIL 223

  Fly   312 NSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFA 376
            ||||:||||.|:||.:....:|.:       ..:|||||||.|.|||||||..||:||||:||||
 Frog   224 NSMHKYQPRFHIVRANDILKLPYS-------TFRTYVFPETEFIAVTAYQNDKITQLKIDNNPFA 281

  Fly   377 KGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDPSSMALFEKARQHLQMFGG 441
            |||||:.   :..|:..:.|.|:.     :|.:.|...:...:..:.||.....|.         
 Frog   282 KGFRDTG---NGRREKRKQLALQS-----MRPYDDHQKKDNGSSDESSSEQTAYKC--------- 329

  Fly   442 NSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQA 506
               :||...|.......::....||..|........:..|........|........:.|     
 Frog   330 ---FAQTSSPTAPAVGTSSLKGVPPSDGESDEESRDEGGPDTGESTKISTTTSEDCRELA----- 386

  Fly   507 QAQAAAAAMAANRTPPPPP-----TASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQGPPSSAA 566
                         :||..|     :.|...|:.:|..|||      .|.||..:      .||::
 Frog   387 -------------SPPRAPHSDLGSRSREQSSRTGKSSPD------SRHSPGHI------SSSSS 426

  Fly   567 GSPPAVNASRSPA 579
            |...::...:|||
 Frog   427 GRILSIEELKSPA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 104/195 (53%)
tbx3NP_001027524.1 T-box_TBX2_3-like 105..286 CDD:410314 104/207 (50%)
TBX 304..381 CDD:432659 13/88 (15%)

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