DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx20

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_919239.1 Gene:Tbx20 / 57246 MGIID:1888496 Length:445 Species:Mus musculus


Alignment Length:498 Identity:198/498 - (39%)
Similarity:268/498 - (53%) Gaps:117/498 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TTTASKSAAGSATDFSIAAIMAREDASSRESSIRSASPISVEDEVDVDVVDCSDAEEPPTKARRL 91
            |.:.....:..|..|||||:|:......:|::..:..|:.       ..|:.|...:|..:...|
Mouse     4 TASPKPQLSSRANAFSIAALMSSGGPKEKEAAENTIKPLE-------QFVEKSSCAQPLGELTSL 61

  Fly    92 NHHQHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTASAESQLNTSSTSSQGRCSTP--PQSP 154
            :                       ||.....||              .|.||...|:.|  |.:|
Mouse    62 D-----------------------AHAEFGGGG--------------GSPSSSSLCTEPLIPTTP 89

  Fly   155 GTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTV 219
                               |:.|   :::..:.|.||||||||:||:|||||||||:|||||||:
Mouse    90 -------------------IIPS---EEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTI 132

  Fly   220 RVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCE 284
            ||||||    :.|..:|.|||||:|:|:||||||||||:|||||||||..|||||.||||||:.|
Mouse   133 RVSFSG----VDPESKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGE 193

  Fly   285 ALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLV-RLSHGQSIPSNPKELQDLDHKTYV 348
            .|.||::|||||||||||:|::|.|:|||||:||||:|:: :..|..|:    ..|:..:.:|::
Mouse   194 QLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASL----LNLKSEEFRTFI 254

  Fly   349 FPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQ-LRSPLRLFPDP 412
            |||||||||||||||||||||||||||||||||||||||.:|:.:|:|:.:.. .|||:|.:.:.
Mouse   255 FPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGEE 319

  Fly   413 LMQQFAAQGDPSSMALFEKAR-----------------QHLQ-------------------MFGG 441
            .:....:|...|..:.|..:.                 ||.|                   :.|.
Mouse   320 DVLGEESQTTQSRGSAFTTSDNLSLSSWVSSSSSFPGFQHPQPLTALGTSTASIATPIPHPIQGS 384

  Fly   442 NSPYAQLMMPQMYQAAAAA---AGPPPPPPGLGAFHMFQQQWP 481
            ..||::|.||....|.|::   :||..|...:..:|.:.||.|
Mouse   385 LPPYSRLGMPLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 138/199 (69%)
Tbx20NP_919239.1 TBOX 98..290 CDD:238106 138/199 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..337 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831483
Domainoid 1 1.000 287 1.000 Domainoid score I1576
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2518
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004466
OrthoInspector 1 1.000 - - oto92085
orthoMCL 1 0.900 - - OOG6_107249
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2836
SonicParanoid 1 1.000 - - X2653
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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