DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and vegt

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_988858.1 Gene:vegt / 394452 XenbaseID:XB-GENE-1033829 Length:455 Species:Xenopus tropicalis


Alignment Length:511 Identity:152/511 - (29%)
Similarity:216/511 - (42%) Gaps:132/511 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NVAHKSRNSGGAVAQTASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSC 178
            |...:.|.|.|.:....|       ||.:|..:.|....|..::||         ...|..||: 
 Frog     3 NCCQEHRLSAGHLEPETS-------SSCASDVKSSPDMDSVSSQDS---------LYLPNSVGA- 50

  Fly   179 NCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDII 243
                      .||.:.||.:||..||||||||:||||.|..::...|    :.|..:|.:|:|.:
 Frog    51 ----------SLEDQVLWAQFHQEGTEMIITKSGRRMLPQCKIRLFG----LHPYAKYMLLVDFV 101

  Fly   244 PMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQ 308
            |:|:  :||.::::.|..||||:|.||.|.|.|||||.......|..|.|:|:|||||.:|:.|.
 Frog   102 PLDN--FRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDAICFQKLKLTNNTLDQQGH 164

  Fly   309 IVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSN 373
            |:|:|||||:||.|:|:   ...:.::|..|.    :.:.||||.|||||||||:.||||||:.|
 Frog   165 IILHSMHRYKPRFHVVQ---SDDMYNSPWGLV----QVFSFPETEFTAVTAYQNEKITKLKINHN 222

  Fly   374 PFAKGFRDSSR-------------------------------LTDFDRDPMEALLLEQQLRSPLR 407
            |||||||:..|                               ::||   |....:.|:.:..|..
 Frog   223 PFAKGFREQERRHKRDDVLKTLQQSPSKRQKRKKWEDSPEAEISDF---PKATRVKEESIMDPAG 284

  Fly   408 LFPDPLMQQFAAQG----------------DPSSMALF------EKARQHLQMFGGNSPY----- 445
            ::.:.:....|.||                .|||.:.|      .::.|||     :|||     
 Frog   285 VYQNWVSDHEANQGLTPHSPESEGANQEQQVPSSSSNFYNRNPYRRSSQHL-----SSPYDLGEP 344

  Fly   446 -AQLMMPQMYQAAAAAAGPPPPPPGLGAFHMF--QQQWPQLTAGFLASANQQAA--------AAQ 499
             ::.:.|.:      |..|...|..|...|:.  |......|.|...|...|..        :..
 Frog   345 SSRRLTPDV------ATVPDSDPDSLAVLHVIPTQNSTQDRTCGVNFSMEAQMKQPLRGAMYSPY 403

  Fly   500 AAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFS--PY 553
            .|.|....||.....|.....|       |..||......|......:.::|  ||
 Frog   404 GAEQWMVPAQGQYRPMGYTAYP-------TDLSTQGAVAHPHSGMSDWSQYSLFPY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 94/195 (48%)
vegtNP_988858.1 T-box_VegT-like 48..230 CDD:410323 95/205 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 5/49 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..360 16/75 (21%)

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