Protein Alignment mid and Tbx6

DIOPT Version :9

• Sequence 1: NP_001260096.1
• Gene: mid / 33770
• FlyBaseID: FBgn0261963
• Length: 580
• Species: Drosophila melanogaster
• Sequence 2: XP_038941217.1
• Gene: Tbx6 / 365371
• RGDID: 1307716
• Length: 463
• Species: Rattus norvegicus
• Alignment Length: 450
• Identity: 153/450 - (34%)
• Similarity: 209/450 - (46%)
• Gaps: 104/450 - (23%)

  Fly   148 STPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTG 212
            :.||..|....:   |.||.....|:.:.|     |..|...||.:|||..|..:||||||||.|
  Rat    61 AAPPPLPLLPSA---LGPETAPPPPEALHS-----LPGVSLSLENQELWKEFSAVGTEMIITKAG 117

  Fly   213 RRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRY-AYHRSAWLVAGKADPAPPARLYAH 276
            |||||..|||.:|    :.|..||..|:|::|:|..|||: ..|   |..:|||:|..|.|:|.|
  Rat   118 RRMFPACRVSVTG----LDPEARYLFLLDVVPVDGARYRWQGQH---WEPSGKAEPRLPDRVYIH 175

  Fly   277 PDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLS-----HGQSIPSNP 336
            ||||.:.....:|.:||.:|||||:.:|.:|.::|:|||:|||||||||.:     |...:.|
  Rat   176 PDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQHWGGVAS-- 238

  Fly   337 KELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQ 401
                      :.||||.|.:||||||..||:|||.:||||||||::.|....:||..    ::::
  Rat   239 ----------FRFPETTFISVTAYQNPRITQLKIAANPFAKGFRENGRNCKRERDAR----VKRK 289

  Fly   402 LRSPLRLFPDPLMQQFAAQGD---PSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGP 463
            ||.     |:|:..:....|.   |..|.      .:|:.  |.||    ..|.:..::....||
  Rat   290 LRG-----PEPVATEACGSGGECCPGGMG------PNLRK--GASP----SQPVLSVSSDTPGGP 337

  Fly   464 -------------PPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAM 515
                         |.|.|                      ..|:||:|.|.......|:|.....
  Rat   338 CDSTLGGDIRDSDPEPAP----------------------TPQEAASASAPPCGGPSAEAYLLHP 380

  Fly   516 AANRTPP---PPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQGPPSSAAGSPPAV 572
            ||....|   |..|.|.|.:...|.|:|         :|...|....||.|||..:.|:|
  Rat   381 AAFHGAPSHLPARTPSFPEAPDPGRPAP---------YSAAFLELQPGPGSSAYQTTPSV 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mid	NP_001260096.1	TBOX	185..384	CDD:238106	98/204 (48%)
Tbx6	XP_038941217.1	T-box_TBX6	91..273	CDD:410322	97/200 (49%)
		PHA03247	<293..453	CDD:223021	40/181 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335197
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3585
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.740