DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and TBX10

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_011543294.1 Gene:TBX10 / 347853 HGNCID:11593 Length:430 Species:Homo sapiens


Alignment Length:453 Identity:164/453 - (36%)
Similarity:212/453 - (46%) Gaps:103/453 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 SGGAVAQTASAESQLNTSSTSSQGRCSTP-PQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKP 185
            |.|......|....|.|:|:..:.|..:| |..|.|..:..:...||..:.||          .|
Human    51 SAGLGILAPSETYPLPTTSSGWEPRLGSPFPSGPCTSSTGAQAVAEPTGQGPK----------NP 105

  Fly   186 ----VQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMD 246
                |...||.|.||:.|:.||||||:||.||||||..:|...|    :.....||:|||.||:|
Human   106 RVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILG----MDSLADYALLMDFIPLD 166

  Fly   247 SKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVL 311
            .||||||:|.||||||||||||.|.|::.|||||.......:|::||:|:|||||.:|.||.|:|
Human   167 DKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIIL 231

  Fly   312 NSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFA 376
            |||||||||.|:|.:...:......:|    :.|:::|.||.|||||||||..||:|||.|||||
Human   232 NSMHRYQPRFHVVFVDPRKDSERYAQE----NFKSFIFTETQFTAVTAYQNHRITQLKIASNPFA 292

  Fly   377 KGFRDSSRLTDFDRDPMEAL-LLEQQLRSPLRLFPDPLMQQFAAQGDPSSMALFEKARQHLQMFG 440
            ||||:|    |.|..|:... ||....||...|.|..|......:.||:                
Human   293 KGFRES----DLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPN---------------- 337

  Fly   441 GNSPYAQLMMPQMYQAAAAAAGPP--------PPPPGLGAFHMFQQQWPQLTAGFLASANQQAAA 497
                          :|:|:.:..|        |||..|                 ||.|..:...
Human   338 --------------KASASTSKTPAWLHHQLLPPPEVL-----------------LAPATYRPVT 371

  Fly   498 AQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQG 560
            .|:.      ...|.:.:...||.|.|            .|.|::|..:.|...|  ||.|.|
Human   372 YQSL------YSGAPSHLGIPRTRPAP------------YPLPNIRADRDQGGLP--LPAGLG 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 112/202 (55%)
TBX10XP_011543294.1 TBOX 110..300 CDD:238106 111/201 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141528
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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