DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and org-1

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster


Alignment Length:605 Identity:198/605 - (32%)
Similarity:268/605 - (44%) Gaps:144/605 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NASGQTTTTASKSAAGSATDFSIAAIMAREDASSRESSIRSASPISVEDEVDVDVVDCSDAEEPP 85
            :::|.|.|..|.|:..|.::.|.      .|.||..||...:.|   .|...|.    |:|...|
  Fly    83 HSTGSTGTANSNSSTSSISNPSC------PDQSSSSSSSSVSLP---TDYAGVH----SEASMAP 134

  Fly    86 TKARRLNHHQHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTASA--ESQLNTSSTSSQGRCS 148
            |.                         ...|..:.::||..|.|||.  :.|....:.|::.. :
  Fly   135 TA-------------------------GGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAENG-T 173

  Fly   149 TPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGR 213
            ..|.|......|.    |||..:           |......||||.|||:||..|||||||||||
  Fly   174 VKPNSHNISKGES----EPVHPS-----------LAQAIVVLETKALWDQFHAQGTEMIITKTGR 223

  Fly   214 RMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPD 278
            |||||.:|...|    :.|...|..:||.:|||.||||||:|.|.|:|||||||..|.|::.|||
  Fly   224 RMFPTFQVRIGG----LDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPD 284

  Fly   279 SPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLD 343
            ||.......||::||:|:|||||::|:||.|:||||||||||.|||.|      |.....|.:.:
  Fly   285 SPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYL------PPKNASLDENE 343

  Fly   344 H----KTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRD--SSRLTDFDRDPMEALLLEQQL 402
            |    :|::||||.||||||||||.:|:|||.||||||||||  ::.:|......|.::..|.|.
  Fly   344 HSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQA 408

  Fly   403 RSPLRLFPDPLMQQFAAQGDPSSMALFEKARQHLQM---------FGGNSPYAQLMMPQMYQAAA 458
            |          |:|...|.......|.::.:|..|:         ||.:.....:...|..|...
  Fly   409 R----------MKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQ 463

  Fly   459 AAAGPPPPP---------PGLGAFHMFQQ-------------QWPQLTAGFLASANQQAAAAQAA 501
            .....|..|         |.|..:.|.||             |..|........||||.:..|.:
  Fly   464 GVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQS 528

  Fly   502 AQ----------AQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLP 556
            ..          .|||.|:......::.:..||.||:..:|.::.:                 :.
  Fly   529 QNHTQYGSYHHAYQAQVQSHPLTPHSSSSASPPATAAPGASAATAA-----------------VA 576

  Fly   557 GGQGPPSSAAGSPPAVNASR 576
            ||.|    |||:..|.:|::
  Fly   577 GGAG----AAGAGGATSATQ 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 117/204 (57%)
org-1NP_001285019.1 TBOX 195..389 CDD:238106 117/203 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439055
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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