DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx2b

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_571126.1 Gene:tbx2b / 30253 ZFINID:ZDB-GENE-990726-27 Length:687 Species:Danio rerio


Alignment Length:602 Identity:181/602 - (30%)
Similarity:236/602 - (39%) Gaps:242/602 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SEERLTP-EPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVS 222
            |.:.|.| |.|:..||:.              ||.|:|||:||.|||||:|||:||||||..:|.
Zfish    80 SLKSLEPEEEVEDDPKVT--------------LEAKDLWDQFHKLGTEMVITKSGRRMFPPFKVR 130

  Fly   223 FSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALR 287
            .:|    :....:|.:||||:..|..||:  :|.|.|:|||||||..|.|:|.|||||.:.|...
Zfish   131 ING----LDKKAKYILLMDIVAADDCRYK--FHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWM 189

  Fly   288 KQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPET 352
            .:.::|.|:|||||..||:|..:|||||:||||.|:||.:....:|.:       ..:|||||||
Zfish   190 AKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYS-------TFRTYVFPET 247

  Fly   353 VFTAVTAYQNQLITKLKIDSNPFAKGFRDS--------SRLT-----------DFDRDPMEALLL 398
            .|.|||||||..||:||||:|||||||||:        .:||           ..|||..::...
Zfish   248 DFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRMYEDQCKVDRDGADSDAS 312

  Fly   399 EQQ-------------LRSPLRL------------------------------------------ 408
            ..:             :.||||.                                          
Zfish   313 SSEPTTGRDAGHSPGPVSSPLRFNRGSRDDKTCTDSEHEMDHQNDRCGGSSSPAPKPSSPFRSRS 377

  Fly   409 ---------------FPD----------------------------------------------- 411
                           :||                                               
Zfish   378 EDWGREKPIAEKKDDYPDSRKTSDSIFSIRNLEKDKLESRSRKDTDSSKKDTENSGISGSKDSFS 442

  Fly   412 PLMQQ------FAAQGDPSSMALFEKARQHLQMFGG--NSPYAQLMMPQMYQ------------- 455
            |||.|      |.| |...|:||   :..|.|.|..  |:....|..|..:.             
Zfish   443 PLMVQTESPSHFGA-GHLQSLAL---SGLHSQQFFNPLNTGQPLLFHPGQFAMAPGAFSAMGMGH 503

  Fly   456 --AAAAAAG--------------PPPPPPGLGAFHMFQ-----QQWPQLTAG--FLASANQQAAA 497
              |:.:.||              .|.|.|    ||:.|     |..|..|.|  |.......|||
Zfish   504 LLASVSGAGGLENGSLSAQGTGSTPSPFP----FHLSQHMLASQGIPMPTFGGLFPYPYTYMAAA 564

  Fly   498 AQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSP--SPDMRPRQYQRFSPYQLPGG-- 558
            |           |||:|:         |.:|:.:|:.|.:|  |...|||  .||:|||||..  
Zfish   565 A-----------AAASAL---------PASSSTASSLSRNPFLSSSTRPR--LRFNPYQLPVSIP 607

  Fly   559 QGPPSSAAGSPPAVNAS 575
            |.......|.|..:|.|
Zfish   608 QSTNLLTTGLPSGLNPS 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 103/195 (53%)
tbx2bNP_571126.1 T-box_TBX2_3-like 95..276 CDD:410314 103/207 (50%)
TBX 294..361 CDD:432659 7/66 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..452 13/148 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..687 4/14 (29%)

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