DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx22

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_006257221.1 Gene:Tbx22 / 302369 RGDID:1589764 Length:533 Species:Rattus norvegicus


Alignment Length:391 Identity:150/391 - (38%)
Similarity:194/391 - (49%) Gaps:71/391 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 GGAVAQTASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPE--------------PVQKAPK 173
            |.|::..|.|.|........|:.:...|.:....|..||:...|              |.:|.||
  Rat    14 GMALSSRAHAFSVEALMGRPSKRKAQDPREEMQPELQEEQFIEEGEEILSSPSGDSEQPAEKRPK 78

  Fly   174 IVGS---CNCDDLKP-----------VQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFS 224
            ...|   .:|.|.:.           :|..|:..:||.||||:||||||||.||||||:||:...
  Rat    79 AESSKTVFSCSDNESNSLESLLEESIIQVELQGSDLWKRFHDIGTEMIITKAGRRMFPSVRIKVK 143

  Fly   225 GPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPA--PPARLYAHPDSPFSCEALR 287
            |    :.|..:|.|::|::|:|||||||.||.|.|:|||..|.:  .| |.|.|||||.|.|...
  Rat   144 G----MDPVKQYYVILDVVPVDSKRYRYVYHSSQWMVAGNTDHSCITP-RFYVHPDSPCSGENWM 203

  Fly   288 KQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVR------LSHGQSIPSNPKELQDLDHKT 346
            :|:|||::|||||||||..|.|:|.|||:|:||:|:|.      ||..||.|:.       ..||
  Rat   204 RQIISFDRVKLTNNEMDDKGHIILQSMHKYKPRVHVVEEDSRIDLSLIQSFPTE-------GVKT 261

  Fly   347 YVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPD 411
            :.|.||.||.|||||||.|||||||.|||||||||..|    :|..::..|.....|....:...
  Rat   262 FSFKETEFTTVTAYQNQQITKLKIDRNPFAKGFRDPGR----NRGVLDGFLETYPWRPSFTMDFK 322

  Fly   412 PLMQQFAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPP---PPPGLGAF 473
            |.:.. ...|...|..:....       |..||...|:.|        :..||.   ||..:|..
  Rat   323 PFVPD-TQNGSSGSSPVTSSG-------GAPSPLNSLLSP--------SCSPPTVYIPPSSIGMT 371

  Fly   474 H 474
            |
  Rat   372 H 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 114/217 (53%)
Tbx22XP_006257221.1 TBOX 105..300 CDD:238106 115/210 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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