DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and Tbx22

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001421332.1 Gene:Tbx22 / 302369 RGDID:1589764 Length:533 Species:Rattus norvegicus


Alignment Length:391 Identity:150/391 - (38%)
Similarity:194/391 - (49%) Gaps:71/391 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 GGAVAQTASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPE--------------PVQKAPK 173
            |.|::..|.|.|........|:.:...|.:....|..||:...|              |.:|.||
  Rat    14 GMALSSRAHAFSVEALMGRPSKRKAQDPREEMQPELQEEQFIEEGEEILSSPSGDSEQPAEKRPK 78

  Fly   174 IVGS---CNCDDLKP-----------VQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFS 224
            ...|   .:|.|.:.           :|..|:..:||.||||:||||||||.||||||:||:...
  Rat    79 AESSKTVFSCSDNESNSLESLLEESIIQVELQGSDLWKRFHDIGTEMIITKAGRRMFPSVRIKVK 143

  Fly   225 GPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPA--PPARLYAHPDSPFSCEALR 287
            |    :.|..:|.|::|::|:|||||||.||.|.|:|||..|.:  .| |.|.|||||.|.|...
  Rat   144 G----MDPVKQYYVILDVVPVDSKRYRYVYHSSQWMVAGNTDHSCITP-RFYVHPDSPCSGENWM 203

  Fly   288 KQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVR------LSHGQSIPSNPKELQDLDHKT 346
            :|:|||::|||||||||..|.|:|.|||:|:||:|:|.      ||..||.|:.       ..||
  Rat   204 RQIISFDRVKLTNNEMDDKGHIILQSMHKYKPRVHVVEEDSRIDLSLIQSFPTE-------GVKT 261

  Fly   347 YVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPD 411
            :.|.||.||.|||||||.|||||||.|||||||||..|    :|..::..|.....|....:...
  Rat   262 FSFKETEFTTVTAYQNQQITKLKIDRNPFAKGFRDPGR----NRGVLDGFLETYPWRPSFTMDFK 322

  Fly   412 PLMQQFAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPP---PPPGLGAF 473
            |.:.. ...|...|..:....       |..||...|:.|        :..||.   ||..:|..
  Rat   323 PFVPD-TQNGSSGSSPVTSSG-------GAPSPLNSLLSP--------SCSPPTVYIPPSSIGMT 371

  Fly   474 H 474
            |
  Rat   372 H 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 113/203 (56%)
Tbx22NP_001421332.1 T-box_TBX22-like 105..296 CDD:410326 112/202 (55%)

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