DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx4

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_570989.3 Gene:tbx4 / 30070 ZFINID:ZDB-GENE-991124-5 Length:543 Species:Danio rerio


Alignment Length:582 Identity:172/582 - (29%)
Similarity:244/582 - (41%) Gaps:187/582 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NSGGAVAQT------ASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCN 179
            :.|..|||:      ||..|.|...:|.|..:.:.|.||                          
Zfish    11 DEGMTVAQSGGRPELASDSSHLGLPTTPSNPQNNEPDQS-------------------------- 49

  Fly   180 CDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIP 244
            .:::|.|   |..:|||.:||:.||||||||.||||||:.:|..:|    :.|..:|.:|.||:|
Zfish    50 IENIKVV---LHDRELWKKFHEAGTEMIITKAGRRMFPSYKVKVTG----MNPKTKYILLTDIVP 107

  Fly   245 MDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQI 309
            .|..||::..::  |:|||||:||.|.|||.|||||.:.....:|::||:|:|||||.:|..|.|
Zfish   108 ADDHRYKFCDNK--WMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHI 170

  Fly   310 VLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNP 374
            :|||||:||||:|:|:.....:..|     ::..:.|:||.||.|.:||:|||..||:|||::||
Zfish   171 ILNSMHKYQPRLHIVKADENNAFGS-----KNTAYCTHVFHETAFISVTSYQNHKITQLKIENNP 230

  Fly   375 FAKGFRDS-------SRLTDFDRDPMEALLLEQQLRSP------------LRLFP---------- 410
            ||||||.|       |||...|...:...::.|:|.|.            |...|          
Zfish   231 FAKGFRGSDEGDLRVSRLQGKDYPVISKNMVRQRLISSHGHLSGKLSAGVLSSHPQVLSHYQYDS 295

  Fly   411 ----------DPLMQQFAAQGDPSSMALFEKAR---QHLQMFGGNSPYAQ-----------LMMP 451
                      :.|...|.:..:||.:....|.|   :||:: |...||..           ...|
Zfish   296 GVPLPNSDSQEALSNSFTSSREPSLLYHCFKHRDNPRHLEL-GCKRPYLDTTSSAVSEEHYFRSP 359

  Fly   452 QMYQA--------------------------AAAAAG----PPP-----------PPPGLGAFHM 475
            ..|.:                          ...|.|    |.|           |.|..|...:
Zfish   360 PSYDSPLLSHPYCNEALGSREACMYGGLEGEGGGAVGTDDLPAPSLNCNMWASVQPYPRYGMQTV 424

  Fly   476 FQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPP----------PPTASTP 530
            ...|:...||.|    |..|:||...:......|      ..:.|||.          |||.|:.
Zfish   425 EAMQYQPFTAHF----NSTASAASMVSHHSPSMQ------RPHPTPPDLVTFTTQRVLPPTPSSA 479

  Fly   531 SSTSSGSPSPDM-----------RPRQYQR-FSPYQLPGGQGPPSSAAGSPPAVNASRSPAH 580
            |::.|||...|.           .|.:.|| |:.|           :..||   .::|.||:
Zfish   480 STSPSGSGHHDRAHSSLFHRKAGSPLRSQRDFTGY-----------STHSP---TSTREPAY 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 97/195 (50%)
tbx4NP_570989.3 None

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