DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and MGA

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_005254300.1 Gene:MGA / 23269 HGNCID:14010 Length:3115 Species:Homo sapiens


Alignment Length:225 Identity:93/225 - (41%)
Similarity:130/225 - (57%) Gaps:11/225 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQ 231
            ||:...||....:| .:..:...|:...:|:.|:...||||:||.||||||..|...:|    :.
Human    57 PVKSKGKICLPADC-TVGGITVTLDNNSMWNEFYHRSTEMILTKQGRRMFPYCRYWITG----LD 116

  Fly   232 PADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKV 296
            ...:|.::|||.|:|:  :||.::...|..:|||:|....|::.||:||.:......|.:||.|:
Human   117 SNLKYILVMDISPVDN--HRYKWNGRWWEPSGKAEPHVLGRVFIHPESPSTGHYWMHQPVSFYKL 179

  Fly   297 KLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQ 361
            |||||.:|:.|.|:|:|||||.||:|||.......:    .:|......|:.||:|.|.||||||
Human   180 KLTNNTLDQEGHIILHSMHRYLPRLHLVPAEKAVEV----IQLNGPGVHTFTFPQTEFFAVTAYQ 240

  Fly   362 NQLITKLKIDSNPFAKGFRDSSRLTDFDRD 391
            |..||:||||.|||||||||........||
Human   241 NIQITQLKIDYNPFAKGFRDDGLNNKPQRD 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 85/195 (44%)
MGAXP_005254300.1 T-box_MGA-like 75..260 CDD:410321 84/194 (43%)
MGA_dom 1041..1082 CDD:464998
DUF5585 <1519..1820 CDD:465521
Atrophin-1 1710..>2032 CDD:460830
bHLHzip_MGA 2475..2539 CDD:381481
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.