DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and Tbx1

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001360867.1 Gene:Tbx1 / 21380 MGIID:98493 Length:529 Species:Mus musculus


Alignment Length:473 Identity:171/473 - (36%)
Similarity:222/473 - (46%) Gaps:101/473 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKE 194
            |.|.....:|:..|:|        ||.  |.......||:|.||:..         |...||.|.
Mouse   112 APAPGAAGSSAAESEG--------PGA--SRAAAVKAPVKKNPKVAS---------VSVQLEMKA 157

  Fly   195 LWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAW 259
            |||.|:.||||||:||.|||||||.:|...|    :.|...|.:|||.:|:|.||||||:|.|:|
Mouse   158 LWDEFNQLGTEMIVTKAGRRMFPTFQVKLFG----MDPMADYMLLMDFVPVDDKRYRYAFHSSSW 218

  Fly   260 LVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLV 324
            |||||||||.|.|::.|||||.......||::||:|:|||||.:|.||.|:||||||||||.|:|
Mouse   219 LVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVV 283

  Fly   325 RLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFD 389
            .:...:......:|    :.||:||.||.|||||||||..||:|||.||||||||||... .|:.
Mouse   284 YVDPRKDSEKYAEE----NFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDP-EDWP 343

  Fly   390 RDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDP---------SSMALFEKARQHLQMFG----G 441
            |:.....|              ||:..||...:|         |.....|..|:..:..|    |
Mouse   344 RNHRPGAL--------------PLVSAFARSRNPVASPTQPNGSDKDAAEARREFDRDSGPAALG 394

  Fly   442 NSPY-AQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQ 505
            ::.: .||:...:..|.....|..|.|.|.|..|                         :...|.
Mouse   395 DATHPPQLLARVLSPALPGPGGLVPLPGGSGGRH-------------------------SPPHAD 434

  Fly   506 AQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPG----GQGPPSSAA 566
            .:.:|..|:...:..|...|.|:......:.|     ||      :||.|||    |..|.:...
Mouse   435 LRLEAPGASEPLHHHPYKYPAAAYDHYLGAKS-----RP------APYPLPGLRGHGYHPHAHPH 488

  Fly   567 GSP-----PAVNASRSPA 579
            ..|     ||||.:.:.|
Mouse   489 AHPHHHHHPAVNPAAAAA 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 114/198 (58%)
Tbx1NP_001360867.1 T-box 151..336 CDD:366363 111/192 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831481
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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