DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx-36

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_502266.1 Gene:tbx-36 / 191435 WormBaseID:WBGene00006555 Length:331 Species:Caenorhabditis elegans


Alignment Length:341 Identity:74/341 - (21%)
Similarity:133/341 - (39%) Gaps:95/341 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 TKELWDRFHDLGT-EMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAV--LMDIIPMDSKRYRYA 253
            ||:.|::.  :|. |:::.|..|::||..:.|    :|.:.||..|:|  ..|::    ..:.::
 Worm    31 TKKQWNQL--IGIHEVVVYKDCRKLFPAAKFS----VRGLDPALLYSVEICFDVL----SPFTFS 85

  Fly   254 YHR--SAWLVAGKADPAPPARLYAHPDSPFSCE--ALRKQVI--------------------SFE 294
            |::  ..|:         |.:      :|.:|:  ||...:.                    |.|
 Worm    86 YNKKLEKWI---------PTK------TPVNCQSSALSSMICETGDWFMNGDMDFGALNITSSHE 135

  Fly   295 KVKLTNNEMDKNG-QIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVT 358
            |.|   .::::|. .:.|:|...||.|:.|..:.:.:.|  ..||.:        |.|.:|...|
 Worm   136 KAK---EKIEQNRIAVCLSSRTMYQIRVVLYEMQNDELI--YLKETK--------FDEMIFITCT 187

  Fly   359 AYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDP 423
            .|:.|:..:||...|.|       ||...::....:.    |:.:.|.:|..:.|.::.....:.
 Worm   188 EYRGQVNRELKKSMNRF-------SRKRKYEISGTKC----QRSKRPAKLPVESLDEKELKNAEK 241

  Fly   424 SSMALFE---KARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTA 485
            ..|:|.|   .:..:|..:..|||  |.:...:|.:..     |..|......|.|.|. .||:.
 Worm   242 GIMSLLESSPSSPSYLYQYQYNSP--QSIPSSIYDSLY-----PSSPEEYQMVHTFPQT-DQLSP 298

  Fly   486 GFLASA-------NQQ 494
            .|..|.       |||
 Worm   299 SFQTSPTVHYDFYNQQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 47/219 (21%)
tbx-36NP_502266.1 TBOX 25..215 CDD:214656 49/228 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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