DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx-40

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_502852.1 Gene:tbx-40 / 190679 WormBaseID:WBGene00006559 Length:380 Species:Caenorhabditis elegans


Alignment Length:336 Identity:72/336 - (21%)
Similarity:131/336 - (38%) Gaps:76/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 EMIITKTG-RRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAW---LVAGKA 265
            |||:...| :.:||.:..:.:|    ::...||.||:.|...|:  .||.:....|   .|....
 Worm    25 EMIVNNKGPKPIFPELNFNITG----LEEKSRYVVLLSIQKFDN--IRYGFKNGKWGPSKVRHAT 83

  Fly   266 DPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNE--MDKNGQIVLNSMHRYQPRIHLVRLSH 328
            ......:.:.|||.....|.|.|:.|.|:.|::||::  |||:....:.:||:|.|.:.:..:::
 Worm    84 KKEQEIKYFLHPDGTKLGEELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKYVPVLTVKNITN 148

  Fly   329 GQSIPSNPKELQDLDHKTYVFPETVFTAVT------------AYQNQLI--TKLKIDSN---PFA 376
            .:|  :|.....::   ...||.||:...:            .::|:|.  .|.|..::   |.:
 Worm   149 VES--ANHSMRMEV---AQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGNKRKNTNSREEPSS 208

  Fly   377 KGFRDSSRLTDFD-----------RDPMEALLLEQQLRSPLRLFPD-----------------PL 413
            |..::.:.:...|           .:...:..|:.::.|.:..||.                 |:
 Worm   209 KRSKNETEIAVLDILQVASQSENYNESTNSGRLQNEISSSIHQFPSTSYQNQYPHAYPTVNTPPI 273

  Fly   414 -MQQFAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQ--MYQAAAAAAGPPPPPPGLGAFHM 475
             .|||.|..|......:.|..::|   ..|.......:|.  |.|.|:.|...|        :|.
 Worm   274 YAQQFPAPFDEKQNQFYPKTDENL---APNCAQDASSLPNFAMNQKASFANQYP--------YHP 327

  Fly   476 FQQQWPQLTAG 486
            :..|:.||..|
 Worm   328 YYHQYSQLDHG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 47/201 (23%)
tbx-40NP_502852.1 T-box 24..186 CDD:279278 41/171 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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