DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx-33

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_499506.2 Gene:tbx-33 / 190493 WormBaseID:WBGene00006552 Length:420 Species:Caenorhabditis elegans


Alignment Length:388 Identity:61/388 - (15%)
Similarity:138/388 - (35%) Gaps:109/388 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 ETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAV---LMDIIPMDSKRYRY 252
            :.::||...|.|..|..:...||::||.:...    :..:.|...|.|   |..::|     |:.
 Worm    89 DPQDLWKELHYLSNEQNVLNNGRKIFPALNYK----VEHLNPESNYKVEILLRRMVP-----YQI 144

  Fly   253 AYHRSAW---------LVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTN-------- 300
            .|...:|         .:|.|.:     :::.   ..|:.:.:.:..:....||:.|        
 Worm   145 QYSNGSWSRKNVQSKKTIAMKTE-----KVFV---GEFTGQDIMRTGLDLSDVKVFNIGSDNKKK 201

  Fly   301 ------------NEMD------KNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTY 347
                        .|.|      |...:.:::..:|.|.:.:..:...|.:    :.:.:.:::. 
 Worm   202 VTPYEEMSDAEKREYDTQYSKKKTSMLEVSNECKYIPVLIINEILPNQEL----RLVGEFENEI- 261

  Fly   348 VFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDP 412
                |.|..|::|:|.::..|:..:||.::|  |:.:         ||:.:.:|.||        
 Worm   262 ----TQFATVSSYKNHIVKALRTAANPTSRG--DAKQ---------EAVQVGKQWRS-------- 303

  Fly   413 LMQQFAAQGDPSSMALFEKARQHL--QMFGGNSPYAQLMMPQMYQAAAAAA---GPPPPPPGLGA 472
                       |:.:|.|..|..:  ......:|......|..|...::.:   .|..|.....:
 Worm   304 -----------SNKSLLESLRPSMICTSVSTTAPSTNFHAPLQYPGTSSPSSNFAPMTPSTSFDS 357

  Fly   473 FHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSS 535
            .:          :.|..:::...........:.:...:..:..:|..:||..|||::|.::.:
 Worm   358 AY----------SSFNVTSSTPEQMCYNPIPSMSTDYSFCSFDSATSSPPLQPTATSPEASQN 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 39/230 (17%)
tbx-33NP_499506.2 TBOX 83..296 CDD:214656 41/243 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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