DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx-33

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_499506.2 Gene:tbx-33 / 190493 WormBaseID:WBGene00006552 Length:420 Species:Caenorhabditis elegans


Alignment Length:388 Identity:61/388 - (15%)
Similarity:138/388 - (35%) Gaps:109/388 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 ETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAV---LMDIIPMDSKRYRY 252
            :.::||...|.|..|..:...||::||.:...    :..:.|...|.|   |..::|     |:.
 Worm    89 DPQDLWKELHYLSNEQNVLNNGRKIFPALNYK----VEHLNPESNYKVEILLRRMVP-----YQI 144

  Fly   253 AYHRSAW---------LVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTN-------- 300
            .|...:|         .:|.|.:     :::.   ..|:.:.:.:..:....||:.|        
 Worm   145 QYSNGSWSRKNVQSKKTIAMKTE-----KVFV---GEFTGQDIMRTGLDLSDVKVFNIGSDNKKK 201

  Fly   301 ------------NEMD------KNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTY 347
                        .|.|      |...:.:::..:|.|.:.:..:...|.:    :.:.:.:::. 
 Worm   202 VTPYEEMSDAEKREYDTQYSKKKTSMLEVSNECKYIPVLIINEILPNQEL----RLVGEFENEI- 261

  Fly   348 VFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDP 412
                |.|..|::|:|.::..|:..:||.::|  |:.:         ||:.:.:|.||        
 Worm   262 ----TQFATVSSYKNHIVKALRTAANPTSRG--DAKQ---------EAVQVGKQWRS-------- 303

  Fly   413 LMQQFAAQGDPSSMALFEKARQHL--QMFGGNSPYAQLMMPQMYQAAAAAA---GPPPPPPGLGA 472
                       |:.:|.|..|..:  ......:|......|..|...::.:   .|..|.....:
 Worm   304 -----------SNKSLLESLRPSMICTSVSTTAPSTNFHAPLQYPGTSSPSSNFAPMTPSTSFDS 357

  Fly   473 FHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSS 535
            .:          :.|..:::...........:.:...:..:..:|..:||..|||::|.::.:
 Worm   358 AY----------SSFNVTSSTPEQMCYNPIPSMSTDYSFCSFDSATSSPPLQPTATSPEASQN 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 38/228 (17%)
tbx-33NP_499506.2 TBOX 83..296 CDD:214656 41/243 (17%)

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