DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx-38

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_499526.1 Gene:tbx-38 / 182861 WormBaseID:WBGene00006557 Length:303 Species:Caenorhabditis elegans


Alignment Length:291 Identity:73/291 - (25%)
Similarity:127/291 - (43%) Gaps:46/291 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 NCDDLKPVQCHLETKELWDRFHDLGTEMIITKT-GRRMFPTVRVSFSGPLRQIQPADRYAVLMDI 242
            :|.....::..|.|.|:|:.|:. .||||:|:. ||.:||.:.....|    :.|...|::.:.:
 Worm     3 SCTSPSGIKVSLSTPEIWEEFYP-KTEMIVTRNRGRVIFPHLDYIIKG----LDPGSLYSIYIHL 62

  Fly   243 IPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNG 307
            ..:|..:|:  :....|....|.||..|.:...||....:......:.:||..:|:|||...|:.
 Worm    63 ERVDGIKYK--FDAGEWKEFAKGDPILPIQYKEHPRGKRTGAEWMSEPVSFAHIKITNNPEIKDQ 125

  Fly   308 QIVL-NSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKID 371
            :::| .|||::.|.:.:.::.|.::     ...:|...:.:....|.|..||||||:::..||:.
 Worm   126 KVILVQSMHKHIPVVTVKQVRHYKT-----GYQEDFSGEQFRLEATEFMVVTAYQNEILKNLKVH 185

  Fly   372 SNPFAKGFRDSS--RLTDFDRDPMEALLLEQQLRSPLRLFPD-PLMQQFAAQGDPSSMALFEKAR 433
            .|.||.|||.:.  ||:....:...:.....:|.:|..:.|. .|.||                 
 Worm   186 HNKFASGFRSNGKRRLSSDSENSENSPPKRSKLVTPPTISPQIDLPQQ----------------- 233

  Fly   434 QHLQMFGGNSPY---AQLMMPQMYQAAAAAA 461
                     :||   ...:.||.||...|:|
 Worm   234 ---------TPYYFNQNFVAPQNYQPQFASA 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 56/197 (28%)
tbx-38NP_499526.1 T-box 12..194 CDD:459990 54/193 (28%)

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