DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mid and byn

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_061514760.1 Gene:byn / 1280741 VectorBaseID:AGAMI1_002196 Length:647 Species:Anopheles gambiae


Alignment Length:472 Identity:145/472 - (30%)
Similarity:212/472 - (44%) Gaps:101/472 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETK 193
            |.||    ||.::.........|.|.|........|...:|....::|....|  :.:...|:.:
Mosquito    21 TGSA----NTPTSGGMNGTDAGPISNGANTGGGGGTTTLLQSGSAVMGRGAGD--RSLSVTLDDR 79

  Fly   194 ELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSA 258
            :||.||.:|..|||:||.||||||.|:|:.:|    :.|...|.||::...:||.|::|.  ...
Mosquito    80 DLWLRFQNLTNEMIVTKNGRRMFPVVKVTATG----LDPTAMYTVLLEFSQVDSHRWKYV--NGE 138

  Fly   259 WLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHL 323
            |:..|||:..||..:|.||:||...:...|:.|||.||||| |:.:.||||:|||:|:|:||:||
Mosquito   139 WVAGGKAEAPPPNPVYVHPESPNFGQHWMKEPISFAKVKLT-NKTNGNGQIMLNSLHKYEPRVHL 202

  Fly   324 VRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTD- 387
            |:      :.|:.::.:::  .||.||||.|.|||||||:.:|.|||..|||||.|.|:....| 
Mosquito   203 VQ------VVSDARDQRNV--HTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDS 259

  Fly   388 -FDRD----------PMEALLLEQQLRSPLRLFPDPLMQQFAAQGDPSSMALFEK----ARQHLQ 437
             :.|:          |..|     ..:|||:...|...|.      |.::|...:    ..||.:
Mosquito   260 VYSRESSTYGWLNFHPSYA-----TAQSPLQAQVDRSYQH------PHTVARSNRVAPYTTQHSR 313

  Fly   438 -MFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQW-PQLTAGFLASANQQAAAAQA 500
             ..||:||.....:|     ..:.:.|        .|..:...| .|.||.....:|...:|.| 
Mosquito   314 NTSGGSSPQHSSYLP-----LDSVSSP--------VFSSYPSTWQTQTTASGSYWSNPTGSAVQ- 364

  Fly   501 AAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQGPPSSA 565
                                  .|...:.|.|.:|.:|:....|             ..|.||.|
Mosquito   365 ----------------------QPLLGTNPGSPNSIAPNISPTP-------------SNGSPSYA 394

  Fly   566 AGSP--PAVNASRSPAH 580
            |.||  ||.:.:.:|.|
Mosquito   395 ASSPSYPASHPALTPQH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 88/195 (45%)
bynXP_061514760.1 None

Return to query results.
Submit another query.