DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and LOC110439164

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_021329724.1 Gene:LOC110439164 / 110439164 -ID:- Length:220 Species:Danio rerio


Alignment Length:253 Identity:90/253 - (35%)
Similarity:128/253 - (50%) Gaps:48/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ESQLNTSSTSSQGR-----CSTPPQSPGTEDSE---ERLTPEPVQKAPKIVGSCNCDDLKPVQCH 189
            |..|.:..|.|.||     |.|...|  ..:||   .|...:|.:|..|:              .
Zfish     4 EEDLRSGGTVSSGRGGNDCCITRLLS--VVESELQAGREKGDPTEKQLKV--------------S 52

  Fly   190 LETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAY 254
            ||..|||.:|.::..|||:||.||||||.::||.:|    :.|...|:.|:|..|.|..|::|. 
Zfish    53 LEDAELWRKFKEVTNEMIVTKNGRRMFPVLKVSVTG----LDPNAMYSFLLDFTPADGHRWKYV- 112

  Fly   255 HRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQP 319
             ...|:.|||.:|...:.:|.|||||.......|..:||.||||| |:::..|||:|||:|:|:|
Zfish   113 -NGEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKAPVSFNKVKLT-NKLNGGGQIMLNSLHKYEP 175

  Fly   320 RIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAK 377
            :||:||:.....:.:|           ..|.:|.|.|||||||:.:      :|.|.|
Zfish   176 QIHIVRVGGSHRMVTN-----------ISFTDTQFIAVTAYQNEEV------NNIFTK 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 75/193 (39%)
LOC110439164XP_021329724.1 T-box 51..216 CDD:307177 74/202 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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