DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx19

DIOPT Version :9

Sequence 1:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:488 Identity:142/488 - (29%)
Similarity:204/488 - (41%) Gaps:113/488 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ESQLNTSSTSSQGR-----CSTPPQSPGTEDSE---ERLTPEPVQKAPKIVGSCNCDDLKPVQCH 189
            |..|.:..|.|.||     |.|...|  ..:||   .|...:|.:|..|:              .
Zfish     4 EEDLRSGGTVSSGRGGNDCCITRLLS--VVESELQAGREKGDPTEKQLKV--------------S 52

  Fly   190 LETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAY 254
            ||..|||.:|.::..|||:||.||||||.::||.:|    :.|...|:.|:|..|.|..|::|. 
Zfish    53 LEDAELWRKFKEVTNEMIVTKNGRRMFPVLKVSVTG----LDPNAMYSFLLDFTPADGHRWKYV- 112

  Fly   255 HRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQP 319
             ...|:.|||.:|...:.:|.|||||.......|..:||.||||| |:::..|||:|||:|:|:|
Zfish   113 -NGEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKAPVSFNKVKLT-NKLNGGGQIMLNSLHKYEP 175

  Fly   320 RIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSR 384
            :||:||:.....:.:|           ..|.:|.|.|||||||:.||.|||..|||||.|.|:..
Zfish   176 QIHIVRVGGSHRMVTN-----------ISFTDTQFIAVTAYQNEEITALKIKHNPFAKAFLDAKE 229

  Fly   385 LTDFDRDPMEALLLEQQLRSP----LRLFPDPLMQQFAAQGD---PSSMAL--FEKARQHLQMFG 440
             ....::.:|..:..|.:..|    ....||.|..  |:.|:   |..:.|  .....:|.....
Zfish   230 -RSHPKNHLEPPVENQHMGIPHCGWFISNPDSLCS--ASGGNFPYPGGLPLTHHHHGYKHYPSLH 291

  Fly   441 GN--SPYAQLMMP--------------------QMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQL 483
            |:  :||....:|                    ||:....:..|..||.|.              
Zfish   292 GHRAAPYPSPYLPRHHHRGHNTVSLSDNLSPGVQMFSGHESWTGVSPPGPA-------------- 342

  Fly   484 TAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTAST-----PSSTSSGSPSPDMR 543
                 |..:.|.|.....|.:|.......::...:.:||....:.|     |:..:|.|.||   
Zfish   343 -----AMLSMQPAPNSPGASSQYPCLWTVSSCTVSSSPPGGVVSLTHGQDEPADGASTSASP--- 399

  Fly   544 PRQYQRFSPYQLPGGQGPPSSAAGSPPAVNASR 576
                  .|..|..|    |:.:.||....|.||
Zfish   400 ------CSLLQAHG----PTGSDGSVDPANHSR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_001260096.1 TBOX 185..384 CDD:238106 84/198 (42%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 85/214 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574475
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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