DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx21

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_002940203.2 Gene:tbx21 / 100496799 XenbaseID:XB-GENE-479103 Length:561 Species:Xenopus tropicalis


Alignment Length:645 Identity:174/645 - (26%)
Similarity:238/645 - (36%) Gaps:206/645 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GVPAAPAAP--NASGQTTTTASKSAAGSATDFSIAAIMAREDASSRESSIRSASPISVEDEVDVD 74
            |:...|..|  .::|:..:|......            ||...:..:|.|:..|.::::     .
 Frog    19 GMQGPPTVPPMKSAGELQSTVRLPGT------------ARLQKTDMQSIIKLQSKMTMQ-----S 66

  Fly    75 VVDCSDAEEPPTKARRLNHHQHHQHHQHHHNNNNNNNNNNVAHKSR---NSGGAV---------- 126
            :.|...|.|........|....|:....|    |.....|.|.:||   :||..|          
 Frog    67 IKDAQSATELHGATETQNRTDLHRTMSKH----NTVEMPNGAMQSREELHSGADVQSLPTEQHKY 127

  Fly   127 AQTASAESQLN-TSSTSSQGR------CS-TPPQSP-GTE-------DSEERLTPEPVQKAPKI- 174
            .|:.|.|..|| |.|..|:.|      || |...|| |.|       |:|   .|.|:.....: 
 Frog   128 CQSNSGEDNLNPTFSFPSRIRLLPSSSCSYTQEYSPEGAEAVNYSERDAE---LPYPLSLQHALP 189

  Fly   175 ----VGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADR 235
                .|:..|.....||..|....|||:||...|||||||.||||||.:....:|    :.|..:
 Frog   190 HTNPSGTPECQRSGKVQITLTNYSLWDKFHKHQTEMIITKQGRRMFPFLSFRVAG----LDPVAQ 250

  Fly   236 YAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPA-RLYAHPDSPFSCEALRKQVISFEKVKLT 299
            |.:.:|::..|...:|  |....|...|||:...|. |.|.|||||.:.....:|.:.|.|:|||
 Frog   251 YNLHVDVVLADQNHWR--YQGGKWTQCGKAEGNMPGNRTYQHPDSPNTGAHWMRQEVIFSKLKLT 313

  Fly   300 NNEMDKNG---QIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQ 361
            ||:...|.   .:||.|:|:||||.|:.|:..    |..|:.    ...:::||||.|.||||||
 Frog   314 NNKGASNNVSQMVVLQSLHKYQPRFHVTRVED----PGGPES----QSHSFIFPETQFIAVTAYQ 370

  Fly   362 NQLITKLKIDSNPFAKGFRDSSRL----TDFDR-DPMEALLLEQQLRSPL---RLFPDPLMQQFA 418
            |..||:||||.|||||||||...|    .:.:| .|...:.....|:.|:   |||.       .
 Frog   371 NADITQLKIDHNPFAKGFRDHCDLMCLTPNGERVSPSPPVRYTNYLQEPVPSARLFS-------V 428

  Fly   419 AQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQL 483
            .|.:|.|..|                .:|.:.||:..       ||..|.|              
 Frog   429 EQKEPPSWYL----------------SSQNIAPQLEY-------PPYDPAG-------------- 456

  Fly   484 TAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGS----------P 538
                                       ..||.|....|.|.|.:..|..|.:.:          |
 Frog   457 ---------------------------KMAAYAMKCYPQPSPLSYYPEHTLTSAWGGPAQYHPKP 494

  Fly   539 SPD----MRP-------------------------RQYQRFSPYQLPGGQGPPSSAAGSP 569
            ||.    :||                         .:.:|.|||          |:.|||
 Frog   495 SPAPLGWLRPLLEVQKKEEDSCAWGDTTTYAGYEDSKRRRLSPY----------SSDGSP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 87/199 (44%)
tbx21XP_002940203.2 T-box 204..390 CDD:469628 86/199 (43%)

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