DRSC/TRiP Functional Genomics Resources

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Protein Alignment mid and tbx5b

DIOPT Version :10

Sequence 1:NP_608927.2 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001185700.1 Gene:tbx5b / 100004161 ZFINID:ZDB-GENE-060601-2 Length:422 Species:Danio rerio


Alignment Length:365 Identity:127/365 - (34%)
Similarity:182/365 - (49%) Gaps:67/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 APKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADR 235
            :|.:....:...::.::.:|..|:||.:|||:.|||||||.||||||:.:|..:|    :.|..:
Zfish    38 SPPLQTQLSQQSMEGIKVYLHEKDLWAKFHDVTTEMIITKAGRRMFPSYKVKVTG----LNPKAK 98

  Fly   236 YAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTN 300
            |.:|||||..|..||::|.::  |.::|||:||.|.|||.|||||.|.....:|::||:|:||||
Zfish    99 YILLMDIISADEHRYKFADNK--WSISGKAEPAIPGRLYVHPDSPASGAHWMRQLVSFQKLKLTN 161

  Fly   301 NEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLI 365
            |.:|..|.|:|||||:||||:|:|:.....|..|:     :....|:.|.||.|.|||:|||..|
Zfish   162 NHLDPFGHIILNSMHKYQPRLHIVKADERNSFGSS-----NTSFCTHSFAETTFIAVTSYQNHTI 221

  Fly   366 TKLKIDSNPFAKGFR--DSSRLTDFDRDPMEALLLEQQLRSPLRLFP------------------ 410
            |:|||::||||||||  |...|....|.|.:...|..:..:..|..|                  
Zfish   222 TQLKIENNPFAKGFRGNDDIELHRMSRTPSKEYPLVPRSTARQRAAPPSPDCLSRSEYTVTQKPS 286

  Fly   411 ---------------------DPLMQQFAAQGDPSSMALFEKARQHLQ-MFGGN---------SP 444
                                 ||....|:.|..|..........||.. |:||:         :.
Zfish   287 PGFTCSDTSGDQSLTETPSIHDPTYPLFSYQLSPDVAPSSMDTTQHQPCMYGGSQVGMEELRWAS 351

  Fly   445 YAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLT 484
            |:.....|.:.:|...:|...||..|.     |:.:||.|
Zfish   352 YSDSTTYQSFSSAKEMSGTFVPPADLS-----QELYPQYT 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
midNP_608927.2 T-box_TBX20-like 186..382 CDD:410319 98/197 (50%)
tbx5bNP_001185700.1 T-box_TBX4_5-like 53..237 CDD:410315 97/194 (50%)

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