DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and Tbx18

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_076303.3 Gene:Tbx18 / 76365 MGIID:1923615 Length:613 Species:Mus musculus


Alignment Length:568 Identity:200/568 - (35%)
Similarity:272/568 - (47%) Gaps:127/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 ALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQHHNHHSSNTNNSSNSGNSNTNSKS 217
            :|:|...:.:||..|::|||.|:::|:.....|....:..           ..|.||       .
Mouse    14 SLKAHAFSVEALIGAEKQQQLQKKRRKLATEEAAGAVEDA-----------GCSRSG-------G 60

  Fly   218 SSQRGRSAAAVGAAATPSPPPPP-----PSQSPEELER----------------------LSPEE 255
            :.:.|.|.|...|||   |||..     |::|..:.||                      .||..
Mouse    61 AGEHGCSEADEEAAA---PPPAAGAASGPARSCADAERSCGSRGAAGSCEDGFLQGASPLASPGG 122

  Fly   256 SPAQQPTPKIV--GSCNCDDLTPV------QCHLETKELWDKFHELGTEMIITKSGRRMFPTVRV 312
            ||...|.|.:.  |       ||:      :..|:..|||.:|||:||||||||:||||||.:||
Mouse   123 SPKGSPVPGLARPG-------TPLPAPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRV 180

  Fly   313 SFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEAL 377
            ..||    :.|..:|.:.:|:||:|::||||.||.|.|:|||.||.|.|.|:|.|||.|.|.|..
Mouse   181 KISG----LDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETW 241

  Fly   378 RKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGSP-KELQDMDH-KTFVF 440
            .:||:||:|:||||||:|..|.::|:|||:||||:|::|...|..:  || |.:...:. |.|.|
Mouse   242 MRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDL--SPIKPVPSGEGVKAFSF 304

  Fly   441 PETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLSDFDRDPMDAF-----FFDQHMRTAPLRF 500
            ||||||.|||||||.||:||||.||||||||||.|    :|..::|.     |:...:||.....
Mouse   305 PETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR----NRMGLEALVESYAFWRPSLRTLTFED 365

  Fly   501 FPDPLMSQLTPQEADAASMALLEKARQHLQMFGRSPYTEMLLPHLYQRSAAPPPPPPAPHLSAFQ 565
            .|.      .|::.:.:|.|||:.....:      |.|.   |||...|:...|        ||.
Mouse   366 IPG------IPKQGNTSSSALLQGTGNAV------PATH---PHLLSGSSCSSP--------AFH 407

  Fly   566 LGMWQQQWPQLT-AGFLASANQQAAL-----ALAAAGANRTPPPSMAVAPPAPATPT-------- 616
            ||....|...|. |.:.|.|....||     :||...:..|...|...||  |.||:        
Mouse   408 LGPNTSQLCSLAPADYSACARSGLALNRYSTSLAETYSRLTNQSSETFAP--PRTPSYVSVSSNP 470

  Fly   617 ---SSCGSASPDLRARPQ--LNHYPQRFSP---YQVPQHQASPPASNR 656
               .|.|....|..:.||  |:......||   |.:|....:..|:|:
Mouse   471 SVNMSMGGTDGDTFSCPQTSLSMQISGMSPQLQYIMPSPSGNAFAANQ 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 114/206 (55%)
Tbx18NP_076303.3 Engrailed homology 1 repressor. /evidence=ECO:0000305|PubMed:17584735 18..28 2/9 (22%)
Nuclear localization signal. /evidence=ECO:0000305|PubMed:17584735 36..40 0/3 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..94 16/77 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..145 9/37 (24%)
TBOX 145..340 CDD:238106 114/204 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I3156
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.860

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