DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and Tbx10

DIOPT Version :10

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001413973.1 Gene:Tbx10 / 688822 RGDID:1584144 Length:344 Species:Rattus norvegicus


Alignment Length:393 Identity:149/393 - (37%)
Similarity:200/393 - (50%) Gaps:88/393 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 LSPEESPAQQPT------PKIVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPT 309
            :|.|.....:||      |::         :.|...||.|.||::|::||||||:||:|||||||
  Rat     1 MSTEAYAMAEPTGQGPKNPRV---------SSVMVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPT 56

  Fly   310 VRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSP 374
            .:|...|    :.....||:|:|.:|||.:|||||:|.|:|||||||||..|.|::.|||.|...
  Rat    57 FQVKIVG----MDTLADYALLMDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKG 117

  Fly   375 EALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFV 439
            ....:|:|||:|:|||||.||.:|.::||||||||||.|:|.:...:.   |.:..|: :.|:||
  Rat   118 AQWMRQIVSFDKLKLTNNLMDDNGHIILNSMHRYQPRFHVVFVDPRKD---SARYAQE-NFKSFV 178

  Fly   440 FPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLSDFDRDPMDAFFFDQHMRTAPLRFFPDP 504
            |.||.|||||||||..||:|||.|||||||||::      |.|...|       ...||...|..
  Rat   179 FMETQFTAVTAYQNHRITQLKIASNPFAKGFREA------DPDSWPA-------TPRPLLSIPAR 230

  Fly   505 LMSQLTP--------QEADAASMALLE---KARQHLQMFGRSPYTEMLL------PHLYQR---- 548
            ..|.|.|        :|.|.:..:...   ..:.|.|:.   |..::||      |..||.    
  Rat   231 SRSSLGPCLLKGSAEREKDTSGTSASRPRTPTQTHHQLL---PAPDVLLAPATYRPLPYQNLYPG 292

  Fly   549 -------SAAPPPPPPAPHLSAFQLGMWQQQWPQLTAGFLASANQQAALALAAAGANRTPPPSMA 606
                   |.|...|.|.|::|              |||     ||:.  ...|||....|..::.
  Rat   293 SPSHAGTSRARLAPYPLPNIS--------------TAG-----NQED--PTFAAGLGLLPTSALC 336

  Fly   607 VAP 609
            :.|
  Rat   337 LVP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 T-box_TBX20-like 277..473 CDD:410319 109/195 (56%)
Tbx10NP_001413973.1 None

Return to query results.
Submit another query.