DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and tbx3

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001027524.1 Gene:tbx3 / 613116 XenbaseID:XB-GENE-1018231 Length:701 Species:Xenopus tropicalis


Alignment Length:249 Identity:118/249 - (47%)
Similarity:150/249 - (60%) Gaps:32/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VGAAATPSPPPPPPSQSP---EELERLSPEESPAQQPTPKIVGSCNCDDLTPVQCHLETKELWDK 289
            ||||.|..|......|:.   ..|:.|.|||.....|                :.|||.|:||::
 Frog    68 VGAAETGIPFSSLGHQAAAHLRPLKTLEPEEEVEDDP----------------KVHLEGKDLWEQ 116

  Fly   290 FHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAG 354
            ||:.||||:||||||||||..:|..||    :....:|.:|:|:|..|..||:  :|.|.|:|||
 Frog   117 FHKRGTEMVITKSGRRMFPPFKVRCSG----LDKKAKYILLMDIVAADDCRYK--FHNSRWMVAG 175

  Fly   355 KADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSH 419
            ||||..|.|:|.|||.|.:.|....:||:|.|:|||||..||.|..:|||||:||||.|:||.:.
 Frog   176 KADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND 240

  Fly   420 GQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDS 473
            ...:|.|       ..:|:|||||.|.|||||||..||:||||:|||||||||:
 Frog   241 ILKLPYS-------TFRTYVFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDT 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 105/198 (53%)
tbx3NP_001027524.1 T-box 106..286 CDD:366363 103/192 (54%)
TBX 304..384 CDD:372213
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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