DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and tbr1b

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001108562.1 Gene:tbr1b / 58042 ZFINID:ZDB-GENE-000323-1 Length:676 Species:Danio rerio


Alignment Length:644 Identity:189/644 - (29%)
Similarity:255/644 - (39%) Gaps:165/644 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DFSIAAIMARGGNAPSSREPSERSLSPASVERYSGQDADDDVDVDVVDCSDSE--------MPSA 136
            |:.|.:|   |.|.       ||| ||.. :..:|.....:.| :..|..||.        .|..
Zfish    36 DYPIISI---GDNL-------ERS-SPLK-KNSAGMTNQSEAD-NFADSKDSSGDVQRGKLSPDL 87

  Fly   137 TAAAAAAATTAAAAAAALQAQQQARQALRVAQQQQQQQQ--------QQRQQTHHHATTGKQQRQ 193
            ...|.:..|...:|.          :...::|..|.|..        .|...||...:.....| 
Zfish    88 DGVADSRHTFDGSAG----------ERYLLSQSSQVQPSPTTMFPYPSQHGPTHPAFSIASPSR- 141

  Fly   194 HHNHHSSNTNNSSNSGNSNTNSKSSSQRGRSAAAVGAAATPSPPPPPPSQSPEELERLSPEESPA 258
            :..||...||.:.||..||     ||.:|.:.|..           |.:|          :...|
Zfish   142 YMAHHPVITNGAYNSLLSN-----SSPQGYATAGY-----------PYAQ----------QYGHA 180

  Fly   259 QQPTPKIVGSCNCDDLTP--VQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQI 321
            .|.|.....|.....|.|  .|.:|..:.||.|||...|||||||.||||||.:..:.||    :
Zfish   181 YQGTAFYQFSSAQAGLVPGKAQVYLCNRALWLKFHRHQTEMIITKQGRRMFPFLSFNISG----L 241

  Fly   322 QPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADP-PPPSRIYAHPDCPLSPEALRKQVVSFE 385
            .|...|.:.:||:..|...:|  :....|:..||||. ...:|:|.|||.|.:.....:|.:||.
Zfish   242 DPTAHYNIFVDVILADPNHWR--FQGGKWVPCGKADTNVTGNRVYMHPDSPNTGAHWMRQEISFG 304

  Fly   386 KVKLTNNE--MDKSGQ-VVLNSMHRYQPRIHLVRLSH-GQSIPGSPKELQDMDHKTFVFPETVFT 446
            |:|||||:  .:.:|| |||.|:|:||||:|:|:::. |......|..:|     ||.||||.|.
Zfish   305 KLKLTNNKGATNNTGQMVVLQSLHKYQPRLHVVQVNEDGTEDTSQPGRVQ-----TFTFPETQFI 364

  Fly   447 AVTAYQNQLITKLKIDSNPFAKGFRDSSRL----SDFDRDPMDAFFFDQHMRTAPLRFFPDPLMS 507
            |||||||..||:||||.|||||||||:...    .|.||           :..:|    .|...|
Zfish   365 AVTAYQNTDITQLKIDHNPFAKGFRDNYDTVYTGCDIDR-----------LTPSP----GDSPRS 414

  Fly   508 QLTPQEADAASMALLE--------KARQHLQMFGRSPYTE--------MLLPHLYQRSAAPPPPP 556
            |:.|....|.:.:.|:        |:|.|..: |.:|.|:        :|.|...:.:....|  
Zfish   415 QIMPSARYAMTGSFLQDQFVSSYAKSRFHPGV-GGAPGTDRSVPLSNSLLSPQQTEETTVASP-- 476

  Fly   557 PAPHLSAFQLGMWQQQWPQLTAG----FLASANQQAA-----------LALAAAGANRTPPPSMA 606
                          |:|....|.    |.|||...||           |:.||||....|.|...
Zfish   477 --------------QRWFVTPANNRLDFAASAYDAAAAADFAGNAATLLSYAAAGVKALPLPGAG 527

  Fly   607 VA---------PP--APATPTSSCGSASPDLRARPQLNHYPQR--FSPYQVPQHQASPP 652
            .:         ||  ...||...|..:|..|...|. |....|  .|.|.||..:...|
Zfish   528 CSNRPLGYYGEPPGWGTRTPPQYCSKSSSVLSCWPS-NSVGSRTTASSYLVPGLEDGDP 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 94/205 (46%)
tbr1bNP_001108562.1 TBOX 200..393 CDD:238106 93/203 (46%)
T-box_assoc 415..673 CDD:292794 44/189 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574512
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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