DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and ocm

DIOPT Version :10

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster


Alignment Length:572 Identity:111/572 - (19%)
Similarity:178/572 - (31%) Gaps:207/572 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 AAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQHHN-HHSSNTNNSSNSGNS 211
            |...||.:..:|.:|.|.:.:..::......:.|.......|:.:|..: ...:...|.|:....
  Fly   121 AEPLAAEELSKQMKQQLELLKTGKRSLSLIEETTAIAEVPPKKPKQFPDITEEARVINDSDDRLD 185

  Fly   212 NTNSKSSSQR--GRSAAAVGAAA-TPSPPPPPPSQSPEELERLSPEES----------------- 256
            ...||.:::|  .:|.|.|.|:. .|:|..|...||.:.....|.|::                 
  Fly   186 AAPSKQAAERTPTKSPAQVAASEDVPTPATPSKEQSGQTSTCSSAEKTDKVEKVGGGSKFLDMLI 250

  Fly   257 --------------PAQQPTPKIVGSCNCDD----------------------LTPVQCHLETKE 285
                          ||:   |..|..|..:|                      |.|..|.     
  Fly   251 SKVRVKNFARENNMPAE---PSAVTFCTSEDEGSADFVGFDESVHQPGMLLTPLVPNNCK----- 307

  Fly   286 LWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQ--IQPADRY---AVLLDVVPLDSRRYRYAY 345
                          |..|...|  |..|....:|:  |..:|..   ..||:.:..|.:      
  Fly   308 --------------TTEGNSAF--VSESLDAYMREHHINDSDSQDDKDKLLEPMGHDGQ------ 350

  Fly   346 HRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRK-----------QVVSFEKVKLTNNEMDKSGQ 399
                  |...:.|||       .|.|..||||::           |.....|:.:.|||.:    
  Fly   351 ------VTSHSMPPP-------MDMPAVPEALQRLRTVAERRQYLQRCKNHKMGIINNEAN---- 398

  Fly   400 VVLNSMHRYQPRIHLVRLSHGQSIPGSPKEL----QDMDHKTFVFPETVFTAVTAYQNQLI---- 456
             |...:.|.| |...|::...|::..|..::    |.....::|..|.     :.|..|:|    
  Fly   399 -VYRELQRKQ-RQRKVKIGAMQALQASDSQMPFTRQGWQAASYVATEH-----SKYYYQVIQVDG 456

  Fly   457 ----------TKLKIDSNPFAKGFRDSSRLSDFDRDP-------MDAFFFDQHMRTAPLR----- 499
                      ..||.:.:|:.      ||||..:::.       :|| ...|.::..|.|     
  Fly   457 EMVRLPGAQGNNLKREKSPYL------SRLSRKEQEELKCSEQCLDA-RIQQELKVIPTRVSPPR 514

  Fly   500 -------------FFPDPLMSQ--LTPQEADAA-------SMALLEKARQHLQM---FGR----- 534
                         |.|.||..:  ..|.:.|.|       |||::......|.:   .||     
  Fly   515 NPKILNQYPLPAIFRPCPLSKKPLQRPLDDDTAALLLAGGSMAVVSMPNVELDVMPQLGRPLDEI 579

  Fly   535 -SPYTEMLLPH------LYQRSAAPPPPPPAPHLSAFQLGMWQQQWPQLTAG 579
             ..|.:.:|||      ..:.|.:....|||....|      ::|..|..||
  Fly   580 AKRYLQHILPHHDITREWAEFSVSTLQAPPATMKDA------EEQASQTPAG 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 T-box_TBX20-like 277..473 CDD:410319 43/229 (19%)
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.