DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and tbx1

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:583 Identity:183/583 - (31%)
Similarity:251/583 - (43%) Gaps:160/583 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VDCSDSEMPSATAAAAAAATTAAAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQ 190
            :|.|....|.|.|.:.|...:|...|......:.|     .:..:|..|...|....|::|..::
Zfish     1 MDDSSPLSPKANAFSIACLISARDQAGNTTFDKHA-----TSLDKQAVQNCSRYIKMHYSTVTRE 60

  Fly   191 ----------QRQHHNHHSSNTNNSSNSGNSNTNSKSSSQRGRSAAAVGAAATPSPPPP------ 239
                      |..|....::.|.:|.:|.|:..:...|               |||..|      
Zfish    61 MEAISSPWLTQLSHFCDVAAFTTSSLSSLNTPGSYHLS---------------PSPGDPYSHHES 110

  Fly   240 -----PPSQSPEELERLSPEESPAQQPTPKIVGSCNC----DDLTP-------------VQCHLE 282
                 |.:|........:..::|||..:    |:.||    ...||             :...||
Zfish   111 QFEPCPAAQHAYNYSGSNSAQAPAQGDS----GTSNCSSSSSSSTPNKTLVKKNPKVANINVQLE 171

  Fly   283 TKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHR 347
            .|.|||:|::||||||:||:|||||||.:|...|    :.|...|.:|:|.:|:|.:|||||:|.
Zfish   172 MKALWDEFNQLGTEMIVTKAGRRMFPTFQVKIFG----MDPMADYMLLMDFLPVDDKRYRYAFHS 232

  Fly   348 SSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRI 412
            |||||||||||..|.|::.|||.|.......||:|||:|:|||||.:|.:|.::||||||||||.
Zfish   233 SSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRF 297

  Fly   413 HLVRLSHGQSIPGSPKE-LQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRL 476
            |:|.:.     |....| ..:.::|||||.||.|||||||||..||:|||.||||||||||.   
Zfish   298 HVVYVD-----PRKDSEKYAEENYKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDC--- 354

  Fly   477 SDFDRDPMDAFFFDQHMRTAPLRFFP------DPLMSQLTPQEADAASMALLEKARQHLQMFGRS 535
                 ||.|   :.::.|...|:...      :|:.|  .||:.....    |.:|:.   :.|.
Zfish   355 -----DPED---WPRNHRPGSLQIMSAFARTRNPMSS--PPQQNGTEK----EDSRRE---YDRD 402

  Fly   536 PYTEML---LPHLYQRSAAPPPPPPAPHLSAFQLGMWQQQWPQLTAGFLASANQQAALALAAAGA 597
            |....|   ..|........|..|....|.|.          .||||                  
Zfish   403 PSGNPLHSDPTHQLMSRVLSPALPVLGGLHAV----------PLTAG------------------ 439

  Fly   598 NRTPPPSMAV-APPAPATPTSSCGSASPDLRARPQLNHYPQRF--------------SPYQVP 645
            .|:||..:.: ..|.|           ||     .|:|:|.::              |||..|
Zfish   440 PRSPPHELRLDGHPQP-----------PD-----TLHHHPYKYPATYEHYLGAKTRPSPYPSP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 112/212 (53%)
tbx1XP_005168668.1 TBOX 165..355 CDD:238106 111/206 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574494
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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