DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and Tbx6

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_038941217.1 Gene:Tbx6 / 365371 RGDID:1307716 Length:463 Species:Rattus norvegicus


Alignment Length:462 Identity:160/462 - (34%)
Similarity:213/462 - (46%) Gaps:111/462 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 GAAATP----SPPPPP--PSQSPEELERLSPEESPAQQPTPKIVGSCNCDDLTPVQCHLETKELW 287
            |..|.|    :|||.|  ||       .|.||.:|   |.|:.:.|     |..|...||.:|||
  Rat    52 GIEAAPHTLAAPPPLPLLPS-------ALGPETAP---PPPEALHS-----LPGVSLSLENQELW 101

  Fly   288 DKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLV 352
            .:|..:||||||||:||||||..|||.:|    :.|..||..||||||:|..|||  :....|..
  Rat   102 KEFSAVGTEMIITKAGRRMFPACRVSVTG----LDPEARYLFLLDVVPVDGARYR--WQGQHWEP 160

  Fly   353 AGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRL 417
            :|||:|..|.|:|.|||.|.:.....:|.|||.:|||||:.:|..|.::|:|||:|||||||||.
  Rat   161 SGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRA 225

  Fly   418 S-----HGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLS 477
            :     |...:            .:|.||||.|.:||||||..||:|||.:||||||||::.|..
  Rat   226 TQLCSQHWGGV------------ASFRFPETTFISVTAYQNPRITQLKIAANPFAKGFRENGRNC 278

  Fly   478 DFDRDPMDAFFFDQHMRTAPLRFFPDPLMSQLTPQEADAASMALLEKARQHLQMFGRSPYTEMLL 542
            ..:||..    ..:.:|.      |:|:.::......:.....:....|:     |.||..    
  Rat   279 KRERDAR----VKRKLRG------PEPVATEACGSGGECCPGGMGPNLRK-----GASPSQ---- 324

  Fly   543 PHLYQRSAAP----------------PPPPPAPHLSAFQLGMWQQQWPQLTAGFLASANQQAALA 591
            |.|...|..|                |.|.|.|           |:....:|......:.:|.|.
  Rat   325 PVLSVSSDTPGGPCDSTLGGDIRDSDPEPAPTP-----------QEAASASAPPCGGPSAEAYLL 378

  Fly   592 LAAA--GANRTPP---PSMAVAP----PAPAT---------PTSSCGSASPDLRARPQLNHYPQR 638
            ..||  ||....|   ||...||    |||.:         |.||....:|.:  .|...|:.|.
  Rat   379 HPAAFHGAPSHLPARTPSFPEAPDPGRPAPYSAAFLELQPGPGSSAYQTTPSV--TPFAPHFIQG 441

  Fly   639 FSPYQVP 645
             :|:.:|
  Rat   442 -APFPLP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 100/203 (49%)
Tbx6XP_038941217.1 T-box_TBX6 91..273 CDD:410322 99/199 (50%)
PHA03247 <293..453 CDD:223021 39/178 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335196
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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