DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and Tbx1

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_006248681.1 Gene:Tbx1 / 360737 RGDID:1307734 Length:530 Species:Rattus norvegicus


Alignment Length:603 Identity:190/603 - (31%)
Similarity:258/603 - (42%) Gaps:176/603 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 DSEMP-SATAAAAAAATTAAAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQ 193
            |:..| ||.|:|.:.|:..||.|:...|.:..|.:.|                      .|.:|.
  Rat     2 DARSPLSARASAFSIASLVAAEASEGTAHRGPRPSDR----------------------AKLRRL 44

  Fly   194 HHN----HHSSNTNNSSNSGNSNTNSKSSSQRG------------RSAAAVGAAATPSPPPPP-- 240
            ..:    |.|:.|.:......|:.:...:...|            |......|...|.|||||  
  Rat    45 PGSPAGMHFSTVTRDMEAFAASSLSGLGAPSPGADPFGPREPPPPRYDPCTAAPGAPGPPPPPRA 109

  Fly   241 ---------PSQSPEELE-----RLSPEESPAQQPTPKIVGSCNCDDLTPVQCHLETKELWDKFH 291
                     .|.|..|.|     |.:..::|.:: .||:..         |...||.|.|||:|:
  Rat   110 YPFAPAPGAASSSAAESEGPGASRAAAAKAPVKK-NPKVAS---------VSVQLEMKALWDEFN 164

  Fly   292 ELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKA 356
            :||||||:||:|||||||.:|...|    :.|...|.:|:|.||:|.:|||||:|.|||||||||
  Rat   165 QLGTEMIVTKAGRRMFPTFQVKLFG----MDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKA 225

  Fly   357 DPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQ 421
            ||..|.|::.|||.|.......||:|||:|:|||||.:|.:|.::||||||||||.|:|.:.   
  Rat   226 DPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVD--- 287

  Fly   422 SIPGSPKE-LQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLSDFDRDPMD 485
              |....| ..:.:.|||||.||.|||||||||..||:|||.||||||||||.        ||.|
  Rat   288 --PRKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDC--------DPED 342

  Fly   486 AFFFDQHMRTAPLRFFPDPLMSQL--------TPQEADAASMALLEKARQHLQMFGRSPYTEMLL 542
               :.::.|...|     ||:|..        :|.:.:.|...:.|..|:               
  Rat   343 ---WPRNHRPGAL-----PLVSAFARSRNPVASPTQPNGADKDVAEARRE--------------- 384

  Fly   543 PHLYQRSAAPPPPPPAPHLSAFQLGMWQQQWPQLTAGFLASA--NQQAALALAAAGANRTPPPSM 605
               :.|.:.|.....|.|.            |||.|..|:.|  .....:.|......|..||..
  Rat   385 ---FDRDSGPAALGDATHP------------PQLLARVLSPALPGPGGLVPLPGGSGGRHSPPHA 434

  Fly   606 AVAPPAPATPTSSCGSASPDLRARPQLNHYPQRF---------------SPYQVP---------- 645
            .:...||       |::.|       |:|:|.::               :||.:|          
  Rat   435 DLRLEAP-------GASEP-------LHHHPYKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPH 485

  Fly   646 ------QHQASPPASNRA 657
                  .|....||.|.|
  Rat   486 AHPHAHPHHHHHPAVNPA 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 113/199 (57%)
Tbx1XP_006248681.1 TBOX 150..339 CDD:238106 113/205 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335217
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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