DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and mid

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001260096.1 Gene:mid / 33770 FlyBaseID:FBgn0261963 Length:580 Species:Drosophila melanogaster


Alignment Length:626 Identity:375/626 - (59%)
Similarity:425/626 - (67%) Gaps:128/626 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ATDFSIAAIMARGGNAPSSREPSERSLSPASVERYSGQDADDDVDVDVVDCSDSEMPSATAAAAA 142
            ||||||||||||  ...||||.|.||.||.|||        |:||||||||||:|.|...|    
  Fly    38 ATDFSIAAIMAR--EDASSRESSIRSASPISVE--------DEVDVDVVDCSDAEEPPTKA---- 88

  Fly   143 AATTAAAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQHHNHHSSNTNNSSN 207
                                               |:..||      |..|||.||.:|.||::|
  Fly    89 -----------------------------------RRLNHH------QHHQHHQHHHNNNNNNNN 112

  Fly   208 ------------------SGNSNTNSKSSSQRGRSAAAVGAAATPSPPPPPPSQSPEELERLSPE 254
                              |..|..|:.|:|.:||.:         :||..|.::..|  |||:||
  Fly   113 NNVAHKSRNSGGAVAQTASAESQLNTSSTSSQGRCS---------TPPQSPGTEDSE--ERLTPE 166

  Fly   255 ESPAQQPTPKIVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLR 319
              |.|: .||||||||||||.|||||||||||||:||:|||||||||:|||||||||||||||||
  Fly   167 --PVQK-APKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLR 228

  Fly   320 QIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSF 384
            |||||||||||:|::|:||:|||||||||:|||||||||.||:|:|||||.|.|.|||||||:||
  Fly   229 QIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISF 293

  Fly   385 EKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVT 449
            ||||||||||||:||:||||||||||||||||||||||||.:||||||:||||:|||||||||||
  Fly   294 EKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVT 358

  Fly   450 AYQNQLITKLKIDSNPFAKGFRDSSRLSDFDRDPMDAFFFDQHMRTAPLRFFPDPLMSQLTPQEA 514
            |||||||||||||||||||||||||||:|||||||:|...:|.:| :|||.||||||.|...| .
  Fly   359 AYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLR-SPLRLFPDPLMQQFAAQ-G 421

  Fly   515 DAASMALLEKARQHLQMF-GRSPYTEMLLPHLYQRSAA---PPPPPPAPHLSAFQLGMWQQQWPQ 575
            |.:||||.|||||||||| |.|||.::::|.:||.:||   ||||||.  |.||.  |:||||||
  Fly   422 DPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPG--LGAFH--MFQQQWPQ 482

  Fly   576 LTAGFLASANQQAALALAAA-------------GANRTPPPSMAVAPPAPATPTS-SCGSASPDL 626
            ||||||||||||||.|.|||             .|||||||     ||..:||:| |.||.|||:
  Fly   483 LTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPP-----PPTASTPSSTSSGSPSPDM 542

  Fly   627 RARPQLNHYPQRFSPYQVPQHQ-------ASPPASNRAESP 660
            |.|..     |||||||:|..|       .||||.|.:.||
  Fly   543 RPRQY-----QRFSPYQLPGGQGPPSSAAGSPPAVNASRSP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 176/198 (89%)
midNP_001260096.1 TBOX 185..384 CDD:238106 176/198 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446247
Domainoid 1 1.000 282 1.000 Domainoid score I1619
eggNOG 1 0.900 - - E1_KOG3585
Homologene 1 1.000 - - H135956
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0004466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107249
Panther 1 1.100 - - P PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2836
SonicParanoid 1 1.000 - - X2653
1110.780

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