DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and Tbx20

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_006242782.1 Gene:Tbx20 / 315497 RGDID:1309396 Length:446 Species:Rattus norvegicus


Alignment Length:592 Identity:209/592 - (35%)
Similarity:277/592 - (46%) Gaps:192/592 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SFATDFSIAAIMARGGNAPSSREPSERSLSPASVERYSGQDADDDVDVDVVDCSD--SEMPSATA 138
            |.|..|||||:|:.||  |..:|.:|.::.|  :|::          |:...|:.  .|:.|..|
  Rat    13 SRANAFSIAALMSSGG--PKEKEAAENTIKP--LEQF----------VEKSSCAQPLGELTSLDA 63

  Fly   139 AAAAAATTAAAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQHHNHHSSNTN 203
                                                         ||..|               
  Rat    64 ---------------------------------------------HAEFG--------------- 68

  Fly   204 NSSNSGNSNTNSKSSSQRGRSAAAVGAAATPSPPPPPPSQSPEELERLSPEESPAQQPTPKIVGS 268
               ..|.|:                            ||.|....|.|.        ||..|:.|
  Rat    69 ---GGGGSS----------------------------PSSSSLCTEPLI--------PTTPIIPS 94

  Fly   269 CNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDV 333
               :::..:.|.|||||||||||||||||||||||||||||:||||||    :.|..:|.||:|:
  Rat    95 ---EEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSG----VDPEAKYIVLMDI 152

  Fly   334 VPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSFEKVKLTNNEMDKSG 398
            ||:|::||||||||||||||||||||.|:|:|.|||.|.:.|.|.||:||||||||||||:|:.|
  Rat   153 VPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHG 217

  Fly   399 QVVLNSMHRYQPRIHLV-RLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKID 462
            .::|||||:||||:|:: :..|..|:    ..|:..:.:||:|||||||||||||||||||||||
  Rat   218 HIILNSMHKYQPRVHIIKKKDHTASL----LNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKID 278

  Fly   463 SNPFAKGFRDSSRLSDFDRDPMDAFFFDQHMRTAPLRFFPDPLM----SQLTPQEADAASMALLE 523
            ||||||||||||||:|.:|:.:::.........:|:|.:.:..:    ||.||....|.:     
  Rat   279 SNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGEEDVLGEESQTTPNRGSAFT----- 338

  Fly   524 KARQHLQMFGRSPYTEMLLPHLYQRSAAPPPPPPAPHLSAFQLGMWQQQWPQLTAGFLASANQQA 588
                                             .:.:||.       ..|...::.|....:.|.
  Rat   339 ---------------------------------TSDNLSL-------SSWVSSSSSFPGFQHPQP 363

  Fly   589 ALALAAAGAN-RTP---------PP----SMAVAPPAPATPTSSCGSASPDLRARPQLNHYPQRF 639
            ..||..:.|: .||         ||    .|.:.|.|.|:.....|...|... .|:.:||.|: 
  Rat   364 LTALGTSTASIATPIPHPIQGSLPPYSRLGMPLTPSAIASSMQGSGPTFPSFH-MPRYHHYFQQ- 426

  Fly   640 SPYQVPQ 646
            .||...|
  Rat   427 GPYAAIQ 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 138/199 (69%)
Tbx20XP_006242782.1 TBOX 99..291 CDD:238106 138/199 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335219
Domainoid 1 1.000 286 1.000 Domainoid score I1535
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135956
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107249
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2653
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.740

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