DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H15 and Tbx1

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001360867.1 Gene:Tbx1 / 21380 MGIID:98493 Length:529 Species:Mus musculus


Alignment Length:585 Identity:186/585 - (31%)
Similarity:254/585 - (43%) Gaps:141/585 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 DSEMP-SATAAAAAAATTAAAAAAALQAQQQARQALRVAQQQQQQQQQQRQQTHHHATTGKQQRQ 193
            |:..| ||.|:|.:.|:..||.|    ::..|.:..|.:.:.:.::........|.:|..:....
Mouse     2 DARSPLSARASAFSIASLVAAEA----SEGTAHRGPRPSDRAKLRRLPGSPAGMHFSTVTRDMEA 62

  Fly   194 HHNHHSSNTNNSSNSGNSNTNSKSSSQRGRSAAAVGAAATPSPPPP--------PPSQSPEELER 250
            ......|...:.|...:.....:....|....|||..|  |.||||        |.:......|.
Mouse    63 FAASSLSGLGSPSPGADPFGPREPPPPRYDPCAAVPGA--PGPPPPRAYPFAPAPGAAGSSAAES 125

  Fly   251 LSPEESPAQ------QPTPKIVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPT 309
            ..|..|.|.      :..||:..         |...||.|.|||:|::||||||:||:|||||||
Mouse   126 EGPGASRAAAVKAPVKKNPKVAS---------VSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPT 181

  Fly   310 VRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSP 374
            .:|...|    :.|...|.:|:|.||:|.:|||||:|.|||||||||||..|.|::.|||.|...
Mouse   182 FQVKLFG----MDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKG 242

  Fly   375 EALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGSPKE-LQDMDHKTF 438
            ....||:|||:|:|||||.:|.:|.::||||||||||.|:|.:.     |....| ..:.:.|||
Mouse   243 AQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVD-----PRKDSEKYAEENFKTF 302

  Fly   439 VFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLSDFDRDPMDAFFFDQHMRTAPLRFFPD 503
            ||.||.|||||||||..||:|||.||||||||||.        ||.|   :.::.|...|     
Mouse   303 VFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDC--------DPED---WPRNHRPGAL----- 351

  Fly   504 PLMSQL--------TPQEADAASMALLEKARQHLQMFGRSPYTEMLLPHLYQRSAAPPPPPPAPH 560
            ||:|..        :|.:.:.:.....|..|:                  :.|.:.|.....|.|
Mouse   352 PLVSAFARSRNPVASPTQPNGSDKDAAEARRE------------------FDRDSGPAALGDATH 398

  Fly   561 LSAFQLGMWQQQWPQLTAGFLASA--NQQAALALAAAGANRTPPPSMAVAPPAPATPTSSCGSAS 623
            .            |||.|..|:.|  .....:.|......|..||...:...||       |::.
Mouse   399 P------------PQLLARVLSPALPGPGGLVPLPGGSGGRHSPPHADLRLEAP-------GASE 444

  Fly   624 PDLRARPQLNHYPQRF---------------SPYQVP----------------QHQASPPASNRA 657
            |       |:|:|.::               :||.:|                .|....||.|.|
Mouse   445 P-------LHHHPYKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHAHPHHHHHPAVNPA 502

  Fly   658  657
            Mouse   503  502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 113/199 (57%)
Tbx1NP_001360867.1 T-box 151..336 CDD:366363 110/193 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831480
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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