DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and tbx-40

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_502852.1 Gene:tbx-40 / 190679 WormBaseID:WBGene00006559 Length:380 Species:Caenorhabditis elegans


Alignment Length:398 Identity:84/398 - (21%)
Similarity:139/398 - (34%) Gaps:132/398 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 EMIITKSG-RRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPP 359
            |||:...| :.:||.:..:.:|    ::...||.|||.:...|:  .||.:....|         
 Worm    25 EMIVNNKGPKPIFPELNFNITG----LEEKSRYVVLLSIQKFDN--IRYGFKNGKW--------- 74

  Fly   360 PPSRI------------YAHPDCPLSPEALRKQVVSFEKVKLTNNE--MDKSGQVVLNSMHRYQP 410
            .||::            :.|||.....|.|.|:.:.|:.|::||::  |||.....:.:||:|.|
 Worm    75 GPSKVRHATKKEQEIKYFLHPDGTKLGEELMKETIKFDTVRITNHKKFMDKDNVFFVETMHKYVP 139

  Fly   411 RIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSR 475
            .:.:..:::.:|...|.:    |:...| ||      ||.|..:.|...|   :.|.|.....:|
 Worm   140 VLTVKNITNVESANHSMR----MEVAQF-FP------VTVYNQESIGNWK---SKFHKNATFENR 190

  Fly   476 LSDFDRDPMDAFFFDQHMRTAPLRFFPDPLMSQLTPQEADAASMALLEKARQ------------- 527
            |...::..      :.:.|..|        .|:.:..|.:.|.:.:|:.|.|             
 Worm   191 LDGGNKRK------NTNSREEP--------SSKRSKNETEIAVLDILQVASQSENYNESTNSGRL 241

  Fly   528 ------HLQMFGRSPYTEMLLPHLYQRSAAPPPPPPAPHLSAFQLGMWQQQWPQLTAGFLASANQ 586
                  .:..|..:.|... .||.|.....||              ::.||:|   |.|....||
 Worm   242 QNEISSSIHQFPSTSYQNQ-YPHAYPTVNTPP--------------IYAQQFP---APFDEKQNQ 288

  Fly   587 QAALALAAAGANRTPPPSMAVAPPAPATPTSSCGSASPDLRARPQL---------NHYPQRFSPY 642
            .                       .|.|..:...:.:.|..:.|..         |.||  :.||
 Worm   289 F-----------------------YPKTDENLAPNCAQDASSLPNFAMNQKASFANQYP--YHPY 328

  Fly   643 QVPQHQAS 650
               .||.|
 Worm   329 ---YHQYS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 48/193 (25%)
tbx-40NP_502852.1 T-box 24..186 CDD:279278 48/189 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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