DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and mls-1

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_498640.1 Gene:mls-1 / 186741 WormBaseID:WBGene00003376 Length:252 Species:Caenorhabditis elegans


Alignment Length:220 Identity:95/220 - (43%)
Similarity:137/220 - (62%) Gaps:26/220 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 AQQPTPK---IVGSCNCDDLTPVQCHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLR 319
            |::|..|   |:...||..   ::..|::..||.:||.||||||:||||||||||:.|..:|   
 Worm    12 ARKPVEKRKQIITKDNCKF---IRVFLQSSNLWRRFHNLGTEMIVTKSGRRMFPTLSVIIAG--- 70

  Fly   320 QIQPADRYAVLLDVVPLDSRRYRYAYHRSSWLVAGKADPPPPSRIYAHPDCPLSPEALRKQVVSF 384
             :.|...|.|::|:..::.:|:||::|:|.|:..|..:...|||::.|.|.|.......:..|||
 Worm    71 -LDPVKSYVVMVDLECIEMKRFRYSFHQSKWISTGPGESELPSRMFVHTDSPARGAHWMRAPVSF 134

  Fly   385 EKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHK--TFVFPETVFTA 447
            :|:|||||::|.:|.:::||||:|:||:|::.              ||...|  ||.|.||.|.|
 Worm   135 DKMKLTNNQLDNNGHIIVNSMHKYRPRVHIIE--------------QDDSQKRHTFSFEETEFIA 185

  Fly   448 VTAYQNQLITKLKIDSNPFAKGFRD 472
            ||||||..||.|||:|||||||||:
 Worm   186 VTAYQNHRITSLKIESNPFAKGFRE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 89/199 (45%)
mls-1NP_498640.1 TBOX 31..212 CDD:238106 89/198 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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