DRSC/TRiP Functional Genomics Resources

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Protein Alignment H15 and sea-1

DIOPT Version :9

Sequence 1:NP_608926.2 Gene:H15 / 33769 FlyBaseID:FBgn0016660 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_494611.1 Gene:sea-1 / 173710 WormBaseID:WBGene00004750 Length:376 Species:Caenorhabditis elegans


Alignment Length:261 Identity:73/261 - (27%)
Similarity:116/261 - (44%) Gaps:45/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 PSPPPPPPSQSPEELERLSPEESPAQQPTPK--------IVGSCNCDDLTPVQCHLETKELWDKF 290
            ||.||..|:.|| :|.....|..|....|.|        ::.:...:|  .|:..|..:|.|.||
 Worm   119 PSSPPSIPATSP-QLPLAESENVPESSSTLKDHKFSLNTMLFNVKKND--AVKISLANQEQWAKF 180

  Fly   291 HELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPADRYAVLLDVVPLDSRRYRYAYHRSSW---LV 352
            ||:||||::..||||:||.:....||    :.|...|...:.::|..:.:..|.:....|   |.
 Worm   181 HEIGTEMMVFNSGRRLFPLLAYKVSG----LDPHKLYCAGVHMIPDSAYKQEYDHDLQQWVNCLN 241

  Fly   353 AGKADPPPPSRIYAH--------------PDCPLSPEALRKQV-VSFEKVKLTNNEMDKSGQVVL 402
            ..|....|.|.|...              .|..:...|:||:. :..||.:..|  :||:.:|::
 Worm   242 QKKTIFKPTSEILGRIENGFKLMSLGIDMSDVKIFNIAIRKKTPLQIEKSRKPN--LDKTIEVLI 304

  Fly   403 NSMHRYQPRIHLVRLSHGQSIPGSPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFA 467
              .::|.|.|.:..||:      |..|.:::...|  ||||.|..|:.|:||.|.::|...|.:.
 Worm   305 --QYKYLPVIKIYELSN------SGMEKKEIAQAT--FPETSFVTVSIYRNQKIKEMKTLGNKYC 359

  Fly   468 K 468
            :
 Worm   360 R 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H15NP_608926.2 TBOX 276..475 CDD:238106 60/211 (28%)
sea-1NP_494611.1 TBOX 167..369 CDD:214656 60/210 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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